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Detailed information on CNT30695002


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT001034, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104696Oryza sativaOryza rufipogon20.587.0783.05177reverse complement

Expression of CNT30695002

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MGISADSMRKTTLSSTTCWLSMPPSRRQLDRLSKSLYLCDSDE*

>peptide 2 (32 aa)
MNRVLYGNDKDYPDCIHIGLSSSTWTRGHLWV*

>peptide 3 (54 aa)
MEMTRTTRIVSILVSLVLLGQGDIYGYKCGFDEEDYPVIDYVLVIHAAKSTTAR*

Sequence

>CNT30695002
AGTCAGTCTACCTTCTCTGCTAGGTAGTAGTAGGTATAATCGGGCTTTTCCTATTTTCTAGTCCAACCCATTTCTTTTGTGCAGTGCAAGAAGGTCGTCG
GTGTTCGGCCTCCCTTATCCCAAGAACTCTAGAACTTGTTGGGCTCCTCTCAAACAAGGTCTTCTATATGGGAATCATTGGGTCTCTCCAAGACGTCAAA
AACTGAAGGAGCAATAGATCTTCTCGGCGACGGTCTCAAAGCGGCAGCAAAGTTTTCCCATGATGCCAAGGCAGCTGTAACCTCCATCTTCAAGAGGCCC
CATCCGGGTCTACTACTTGGCAATTTGCAGCTTGCCATAATTTTTGCGAATTTGCAGTCTTTGCCGTCATCGATCAAGGTACAGATGCAGAGGAAGAAGC
AAGATTATGGATGTCATGGTTATGGATACCACGTACCTAATAGTAGTTGACTAAGCTCGGCAGGGCCCATTATGTACCAAGTCTTATACGGAATCATACC
TCGTATATAGAAGGAGTTCCGGATAAGGAAGGATGAATAGAGTTCTATATGGAAATGACAAGGACTACCCGGATTGTATCCATATTGGTCTCTCTAGTTC
TACTTGGACAAGGGGACATCTATGGGTATAAGTGCGGATTCGATGAGGAAGACTACCCTGTCATCGACTACGTGTTGGTTATCCATGCCGCCAAGTCGAC
GACAGCTAGATAGGTTATCCAAATCATTGTACTTGTGTGATTCAGATGAATAAAGAGCAACACTGGCTTCGGCCAACAGGAGTAGGGCTATTACCTGGCA
GATAAGGGGTCCGAACCTGTATAAAAATCCTTGTCTTCATCTCTTTTACCTCAATCTCGC