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Detailed information on CNT30694955


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SH66|DIR5_ARATH, E-value = 2e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
nothing found

Expression of CNT30694955

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MKKSPVPPTTEMSLVFSAMMSAPMRLSVPRRPVELNTMEKANHALNASLLL*

>peptide 2 (29 aa)
MKINKVGIHFAHSSVHITRQANKYISRWK*

>peptide 3 (29 aa)
MTAAIRDGLDQVAICVPSLARSLQSNAAS*

>peptide 4 (44 aa)
EQTSSLLNENKQSWDTFCTFIGAYNSSSKQVYFAMEINHASHRV*

>peptide 5 (30 aa)
MSWSWRCCCCSRRGCRGGRASSPCTARRSS*

Sequence

>CNT30694955
GAGCAAACTTCATCTTTATTGAATGAAAATAAACAAAGTTGGGATACATTTTGCACATTCATCGGTGCATATAACTCGTCAAGCAAACAAGTATATTTCG
CGATGGAAATAAATCACGCATCACACCGTGTATAGCAGTATTATATGTTAATTACCATCTATCAGAATTCAGAGCAACGTAATCAGACGACGTAGCATTC
GTAGAGCTTGATGTCCATCTGCAGCCGGAAGTAGGTGAAGCCCTCGAAGGCGTCGGTGCGGAGGGTGGCGACGCCGCGGGACATGAAGAAGTCGCCGGTG
CCGCCCACGACGGAGATGTCCCTCGTCTTCTCGGCGATGATGTCGGCGCCCATGAGGTTGAGCGTGCCGCGGCGCCCCGTGGAGTTGAACACGATGGAGA
AGGCGAACCACGCGTTGAACGCCTCCTTGCTGTTGTAGAGGTAGACCCCCTGCGCGCGCACCGCCGTCTCCTCCAGCGACGGCGGCAGCGCCCTCCCCTC
CGTCATCGGGTCGTTGAACACCACCACCTGCCCGAAGAAGGTGCCGCCGGTCGACGGCACGGCGGTGGCCAGCGCCGTCGGCTTGGTGGCCGCCGCCGAC
GTGGAGTTGGAGGTGCTGTTGCTGTAGTCGTAGAGGATGTCGTGGAGTTGGAGGTGCTGTTGCTGTAGTCGTAGAGGATGTCGTGGAGGTAGAGCCTCAT
CTCCTTGCACGGCTCGTCGTAGCTCCTGACGAGCCTCCTGCCGCCGCTGCGGCCGCCATTGGCGACGCTCGCCGAGCTAAGGAGGCTGACGAGGAGGAAG
ATGACCGCGGCGATCAGAGATGGCTTGGACCAAGTAGCCATCTGTGTGCCTAGCTTGGCGCGTAGCTTGCAGAGTAATGCAGCTAGCTAAGTAGCTAACA
AACTTAACAATTTGATTAGCCTGTGATCCATCAGCTCGAGAGAATTAATAAGCTAAACGCATGCAATTAAGACAGTACGTGTTGCTGTAGCTTAATAATT
AGCTGATGTGTGGAGCTCGAGTTTGCATGCTTATTTATATATAGTGTCCTTGTGAGGAGTGGCAGACTCCGAGCTAG