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Detailed information on CNT30694941


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577001Oryza sativaOryza barthii10.3724.6594.37142forward

Expression of CNT30694941

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MAMFDMCSSLSRSMVKNTISQVSRTSNLSISFSTQYKRQCAYCRRQPGIGGQERPTDRSGAVPFLGE*

>peptide 2 (34 aa)
MMRNIYSMGKGKGIILSKFNGGPLAASASTCLIV*

>peptide 3 (38 aa)
MFWAPVRNIMYLACPPSKSIRTSPVASLPRASIRQLHL*

>peptide 4 (30 aa)
MTSCPPSPPPPWRRERGRSRKRGGPPAHRR*

>peptide 5 (33 aa)
MFLVSNGTSSPSPASSLSDRLRSRRTRPSRQSC*

Sequence

>CNT30694941
CCAAGGCCAGTAAAACACAAATAGCAATGCAATTCTAATAAGCTTACCATATTCATAGACTTGACGGTGATAAGGATGGCGGAAAACCGGTATATATCTT
TGCAGCGGTAATTGGACGTTCCAACACGCAAATCCTCTTGAGAACCAATGTTTTGGGCTCCAGTGAGAAATATAATGTATCTGGCCTGCCCTCCTTCAAA
GAGCATTCGAACCAGTCCAGTAGCCTCCCTTCCAAGAGCAAGTATCCGTCAGCTGCATCTATGATGCGAAACATATACTCCATGGGCAAGGGCAAGGGGA
TTATTTTGTCAAAATTCAATGGTGGCCCATTGGCAGCATCAGCTTCGACTTGCCTAATTGTATAACAGAGCTGAGTTCTTGTAGTGAAGCCTAAGTCTGT
CCTGAGAGAGAAAACTCCAACCATATCTTCCTCTGCCTCCTCCAGAATGGCAATGTTTGACATGTGTTCATCCCTCTCGAGGTCAATGGTGAAGAACACC
ATCTCACAAGTGTCAAGAACGAGCAACTTGTCCATCTCCTTCAGCACCCAGTACAAGCGGCAATGTGCATACTGTCGACGACAACCAGGGATCGGCGGTC
AAGAGAGACCAACTGACAGATCTGGAGCTGTGCCATTCCTCGGTGAGTGAAGAGAAGACGAAGATGACCACCTTGCTTTCGTAGTTCGCCCTCGCCACCA
CTCTGAATGACGTCGTGCCCACCATCTCCTCCTCCTCCTTGGCGGCGGGAGCGAGGAAGGTCTCGAAAACGAGGAGGCCCTCCTGCTCACCGGAGGTGAT
CAGGTCGTCGGGGATTGGGGGGAGGATGACGTAACGCCTGGATACGGGGTCACAGACGGCGAGATCCGCCATGTTCCTGGTGTCGAACGGGACGAGTTCC
CCTTCACCGGCGTCGTCGTTGTCGGATAGGCTGCGTTCGAGGAGGACGCGGCCATCCCGGCAATCCTGTTGAATCCAGCGGCAGGGGGACGGGAGGAACG
AGAAGGTGAAGTCGGCGGCCTGAGCGAGGGCTCGGGCGGCGGCGGCGGCGGAGGGGTGGGGCGGCTCGGCGGGGTGGAAGCCGTCGTGGCCGAGTAGTCC
CAGGAGGGGAGCCGGCTTGTGGAGGGAGCGGTAGCGGCGGAGGAAGGAGCGGCCGGTGACGAGGCGGCGGAGGCCCGTGCGAGGTCGGCGGGCGAGGCGA
TGCGGAGGAAGATCTCCTCGAGGAGCTCGTCGGCGAGTTGAGGTAGGTCGTAGATCGGCTCCTGCTCCGGCGAGGACATCGTGTCGGCGGCCGCCGGTGG
TCGGGGCGGCGAGAGCAGTAGGGGGACTGGGCAGGAGTGAGGCGGATGGGCAAGTGATGTACGGAGTAG