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Detailed information on CNT30694904


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30109904Oryza sativaOryza longistaminata64.4263.9399.52420forward

Expression of CNT30694904

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MELLLFGEDRMVAKIGQQCMQLPSSFLKFMDKSDFGTWELSLWLYSMF*

>peptide 2 (34 aa)
LSLNYWAGLPAEGMRSSASAGRGGVVEGEEAPEP*

>peptide 3 (55 aa)
MHQMPPLVRSDGAQHRCGLLRSVSTIRPLRLPHQEPQGPRHLLLPCLGHGATIIW*

>peptide 4 (53 aa)
SLTQLLGRPAGGGDEVVGVGRARWRRGGRGGSRTLTLTPSFSFRFVEGSVCSI*

Sequence

>CNT30694904
TCTCTCACTCAACTACTGGGCAGGCCTGCCGGCGGAGGGGATGAGGTCGTCGGCGTCGGCAGGGCGAGGTGGCGTCGTGGAGGGCGAGGAGGCTCCCGAA
CCCTAACCCTAACCCCCTCCTTCTCCTTCAGGTTCGTGGAGGGAAGCGTGTGCAGCATCTAGCCGCGCCCCCGTCGCACCAGCTGCGCTGCTCCGGGGTC
CTCGTCCCCTCCCCGCCACCGATGCATCAGATGCCGCCTCTCGTCAGATCTGACGGAGCTCAACATCGGTGCGGCCTTCTCCGTTCGGTCTCCACCATCC
GGCCACTGCGTCTTCCCCATCAAGAACCTCAAGGACCTCGTCATCTTCTACTACCTTGTCTAGGTCATGGAGCTACTATTATTTGGTGAAGATCGAATGG
TGGCAAAGATAGGACAACAATGCATGCAGTTACCATCTTCATTTCTTAAATTTATGGACAAATCAGATTTTGGGACCTGGGAACTTAGTTTGTGGTTGTA
CTCAATGTTCTAGGTGTTGATGTCCTTTGCTTCCGATTTTATTTTACCTTACTGTGGTGATGTATAAGAAAAACTTCTCAGTGGGCTCTTTGCTAAACAC
TAAAATTTAAATGCTTGTAATATTGTTTGGAGGGCACAGATTGACTTACCAC