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Detailed information on CNT30694903


BLAST search results

BLAST vs Swiss-Prot:
sp|P35793|PR13_HORVU, E-value = 7e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554258Oryza sativaOryza glaberrima41.9453.3295.16289forward
CNT30576932Oryza sativaOryza barthii38.944.7491.42268forward

Expression of CNT30694903

Peptides detected in this lncRNA

>peptide 1 (34 aa)
FLIYFLLLFERQRTYIYNKIPVIIISHIYIILHT*

>peptide 2 (33 aa)
MARTTAMAAASATPDIFGVSICNTTTQFALLIDS

Sequence

>CNT30694903
ATTTTCTCATTTATTTTCTTCTTTTATTCGAACGACAACGTACATATATATATAATAAGATCCCCGTAATTATTATTTCGCACATTTATATCATACTCCA
TACATAGTTAAAGTAAATACTGTATTAATAACTTATTAAGCAGAGAGAGTGAGGCCACGCTCGAAGGGGCGCTCTCCCTGGAAGTTGCCGGCGGGGTTGT
AGTTGCAGTCCACGCGGGCGCAGCCGATCGCCGTCGTGCGGCTCCACATCACCTGCGTGTAGTGGAGGCACGAGTCCCACGACCCCAGGCAGCTGTTGCT
GTCGTAGTCGTACAGATCCTTCTCCCCCACCCAGCTGTTGACGGCGTCCGCTGCCGTCCACTCGCTGCCGGAGCCTCCGAAGAGGTTCTCGCCGTAGCCG
GCCTTCTCCCAGCTGCCGGAGTGGATGAGCGCGCAGTCGCCGGCGCGCTCCGCCGCGTAGTTCTCCGCGTACGCCGCCACGGCGTCGTCCCAGACCACCT
CGCCGACGCCCTCCACGCGTCGCGCCGCGTTGTGGAGGTCCACGAAGTCCTGCGGCGAGTTCTGCGCCACCGCCGGCGTGGTCGCCATGGCCAGAACGAC
GGCAATGGCTGCCGCAAGTGCTACTCCCGATATCTTTGGTGTCTCCATATGCAACACTACTACACAATTTGCTCTCTTAATCGATTCCG