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Detailed information on CNT30694877


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000009, E-value = 4e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554719Oryza sativaOryza glaberrima29.0617.1787.39238reverse complement
CNT30103030Oryza sativaOryza rufipogon26.375.8387.04216forward
CNT30577325Oryza sativaOryza barthii29.0617.1186.97238reverse complement

Expression of CNT30694877

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MTAAEALRRHRHHGNGEDLPVSASHLTSASASASQC*

Sequence

>CNT30694877
GAGCCGAAGGGATTGGGCTGGTTGGGCCAGTCGAGGCGGCCAGGCCCGCGCATGTAGCTAGCAGGCGGTAAGGCTGTGCTAGCTTGGTACGACAGTGGTA
GTCAGCCGATCGCGGAGGAGGCCAGTGGCGAGGACGCGGACGCGGCGAAGGACATCGCGATAAGATGACTGCGGCGGAGGCCCTGCGGCGACATCGTCAC
CACGGCAACGGTGAGGACCTCCCCGTCTCGGCGTCCCACCTGACGTCTGCCTCAGCGTCGGCTTCCCAGTGCTAGTGCAAAGCTAGTTCGAGGATATTCA
GGGGCTGTTTGGATCGGATTTTTAGTCATGTCACGTCGGATGTTTGACACTAATTAGAGTGTTAAACATAGACTATTAACAAAAACTCATTCCATAACCC
TGGACTAATTCACGAGACAAATCTATTGAGATTAATTAATCCATAATTAGCATATGTAATACTACAGTAAATATGTGCTAATTATAGATTAATTAGGCTT
AAAAAATTTATCACACGAATTAGCTCTCATTTATGTAATTAGTTTTGTAAGTAATCTATGTTTAATACTCCAAATTAATGTCTAAATATTCAATGTGATA
GAGACTAAAGTTTAGTCTATGTATCCAAACACCACCTCAGTCGTTTGTGGTCTAGATTATTATCAGTTACTTTTCTTTAGATAATGTATTATCAGTTAAT
AGCAGTTTAGTACCTGCAATCAGTTAGTACTTTGTTTGTAGTCTATGTTATTGTGCAAGTTCAATGGTATGATTTGTAAGCGAGATGCTTGTTCAACCTC
AATTTTCATGTTTCAGCTT