Detailed information on CNT30694850


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102673Oryza sativaOryza rufipogon72.1749.7791.54319forward
CNT30577021Oryza sativaOryza barthii70.8143.3598.72313forward
CNT30496416Oryza sativaDigitaria exilis25.346.0285.71112forward

Expression of CNT30694850

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MWWLAGGPWYHHSRSGARRACAAVWSRALMASYSRITNHWFRCCSDSKSSSSSCRCCWCSSSCCGC*

>peptide 2 (90 aa)
MVPPLEVRGEEGVRGGVVSGVDGLVQPDHQPLVPLLLRLQVFFFFLSLLLVQQQLLRLLILSRRQLLRCQPGDERDDESCTTRNQVKEGDC

Sequence

>CNT30694850
GATTGGTTGAAGCTGATTGATGGTAATCACAATAAGATGATGAATTAGAGGGCGAGGAGGAGGGCCGGGAGGGCGTGGACGGAGAGCGGGCGGAAGCGGA
AGGAGGAAGAGGAGGGCGAGGCGCAGCCGGTGAGGAGGCGCATCATGTGGTGGCTGGCGGGTGGGCCATGGTACCACCACTCGAGGTCCGGGGCGAGGAG
GGCGTGCGCGGCGGTGTGGTCTCGGGCGTTGATGGCCTCGTACAGCCGGATCACCAACCACTGGTTCCGCTGCTGCTCCGACTCCAAGTCTTCTTCTTCT
TCTTGTCGTTGTTGTTGGTGCAGCAGCAGCTGCTGCGGCTGCTGATCCTGTCGAGACGCCAGCTCCTGCGATGCCAGCCCGGGGATGAACGAGACGACGA
GAGTTGCACAACAAGAAACCAAGTGAAGGAGGGAGATTGTGG