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Detailed information on CNT30694786


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554376Oryza sativaOryza glaberrima10090.4799.671225forward
CNT30110329Oryza sativaOryza longistaminata66.2959.5397.17812forward

Expression of CNT30694786

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MPARLRLGNSLCYIYQYILCLCRHTHESVQVL*

>peptide 2 (41 aa)
MNQFRFFDVSIWNSVYATKNTDALSKVYLLKGQGCRQSGDS*

>peptide 3 (34 aa)
MISSLRGTKCTLPFLKLRVRFLLKEYTEFCMYKA*

>peptide 4 (66 aa)
DVTARRSQSPRSGLCKEHASKKNNAVAYAKSTQVILVGYPPRRTTVAQVNASVPRALPTLSTEATT*

Sequence

>CNT30694786
GATGTGACCGCTCGCAGGTCGCAGAGCCCCCGCTCTGGCCTCTGCAAGGAGCACGCTTCTAAGAAGAACAATGCTGTGGCGTACGCAAAGTCCACACAGG
TGATACTAGTTGGGTATCCTCCAAGGAGGACAACGGTGGCCCAGGTGAACGCCAGTGTGCCGAGGGCGTTGCCCACCCTCTCAACGGAGGCAACAACTTG
AACAAAGCAATTCAGCTGCTCTTCTGGCATCGCGCTATGCCAGCTCGCCTCAGGTTGGGCAACTCTCTCTGCTACATCTACCAGTACATTCTCTGTTTGT
GTCGACATACTCATGAATCAGTTCAGGTTCTTTGATGTATCTATCTGGAATTCTGTATATGCTACGAAGAATACTGATGCACTTTCTAAAGTATACCTCC
TGAAGGGGCAGGGTTGTAGGCAATCAGGAGACAGCTGACACGAGAGCACCGGTTAATCCAATGATGAGTCAGCAGCAACTTCGATTACTACGCATGCGAA
GTTCCCTTTATTTGTATTATTCTCCCGATAGAGCTGGAGCATAGTTTTCTTGACTGACATGCCAATGTTCATCTTCTAGGAAAATGTCACAGCTGATGGC
ATCTTCCTCTCTATCTACCTAAGAGTTGTACGCATTACAGAAAAAAAACAAACGGAAGAGAGTAAACTCCAAACTCCAGAGGTGTTGGATTTGGTGATTG
GTCATTGGTTGCGGCGGCGCCGCCGGCCTACCGGGCGTGGAACACCGTACGGCCGGAGAATGATTTCCTCGTTGCGCGGCACGAAATGTACTCTTCCATT
CCTGAAGCTACGGGTACGGTTTCTGCTTAAAGAATACACTGAATTCTGCATGTATAAAGCCTGAACCCGTAGGTCTTCAGCTACCCGGCAGTGTTCAGAT
AAGCAACCCGGATGATTGTTTTGGCTTCTGGATTTATCAAATGAAGTCATTTTGCCTGTTGACTCAGACATAGGATTGCTTGACGTACCCATGATCAAGT
AACATGTATATATAAAATCCGAGAAATGTTATGTGATCTAGTCTAAGAGAATGGTTGAATGAAGAGGATCCTCTTAATTTGGAGATTAAAAACAAGTTGA
TTGAGATGCAATCTGAGTGTACGAGAAGCAGTTATAGAGTTGGCAATGGTATGTAAACCTCTGAAAATGACTGTTGCGTGAAACGGTGAAAGGTTGTCTA
TAAAGATTTTATTTACTGATTATTG