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Detailed information on CNT30694715

BLAST search results

BLAST vs Swiss-Prot:
sp|A5H452|PER70_MAIZE, E-value = 2e-94

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30672255	Oryza sativa	Setaria viridis	12.08	28.44	95	120	forward
CNT30180126	Oryza sativa	Secale cereale	11.98	20.03	92.44	119	forward
CNT30221499	Oryza sativa	Hordeum vulgare	17.93	61.17	85.39	178	forward
CNT30386567	Oryza sativa	Triticum turgidum	9.57	26.69	84.21	95	forward
CNT30688208	Oryza sativa	Triticum urartu	9.77	25.39	82.47	97	forward
CNT30348949	Oryza sativa	Eragrostis tef	11.58	54.25	87.83	115	forward
CNT30596630	Oryza sativa	Oryza meridionalis	38.07	49.22	84.39	378	forward
CNT30370682	Oryza sativa	Oryza glumipatula	24.17	29.7	91.67	240	forward
CNT30102748	Oryza sativa	Oryza rufipogon	40.18	52.16	98.25	399	forward
CNT30577207	Oryza sativa	Oryza barthii	40.99	46.57	98.03	407	forward
CNT30117210	Oryza sativa	Oryza nivara	45.52	65.32	99.56	452	forward
CNT30604331	Oryza sativa	Oryza punctata	23.46	33.82	90.13	233	forward

Expression of CNT30694715

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MFPIFTMAAVKALLNAAVLEEKFLTVLSVLPPLKSTWSECRSRRA*

>peptide 2 (43 aa)
FTWLTRQLKSVAARITTKERSVILMPLHGNSLHDITHAYTYTL*

>peptide 3 (50 aa)
MFPIFTMAAAKSLLNLDGPDAYDRTWPSTAPPLKSTWSECRSPLFDSRLV*

>peptide 4 (49 aa)
MSAWLSPLAANEAVRLATSKDGGGRSLFASAKLAVVESRLPRRTLHDGPP

>peptide 5 (29 aa)
MATRYMTSHMHTPTLSSLFRALADETIEP*

>peptide 6 (35 aa)
MKVMRWPQLAARYWQQCRGLALFPETITYSSSPAS*

>peptide 7 (29 aa)
MKPLNHESDEMATASCTLLAAMSGPSFIP*

Sequence

>CNT30694715
CTTCACTTGGTTAACACGACAGTTGAAATCTGTAGCTGCTAGGATTACGACGAAAGAGAGGTCCGTAATCCTCATGCCTTTGCATGGCAACTCGTTACAT
GACATCACACATGCATACACCTACACTCTCTAGTCTGTTCCGTGCACTTGCTGATGAAACCATTGAACCATGAAAGTGATGAGATGGCCACAGCTAGCTG
CACGCTATTGGCAGCAATGTCGGGGCCTAGCTTTATTCCCTGAGACCATCACGTACTCGTCATCACCGGCTAGTTAACCTTGGAGCAGTTGAGCCTGATC
TGCCCCTGGGTTCCAGTCAAGGGCGAGATGTTCCCCATCTTCACCATGGCCGCCGTGAAGGCGCTGTTGAACGCCGCCGTGTTGGAGGAGAAGTTCCTGA
CCGTGTTGTCCGTGCTGCCGCCGTTGAAGAGCACCTGGTCGGAGTGCAGGAGCAGACGAGCCTGATTTGTCCCTGCGTTCCCGTCAACGGGGCGATGTTC
CCCATCTTCACCATGGCCGCCGCGAAGTCCCTTCTGAACCTCGACGGCCCGGACGCGTACGACCGGACCTGGCCGTCGACGGCGCCGCCGTTGAAGAGCA
CCTGGTCGGAGTGCAGGAGCCCCTTGTTCGACAGCAGGTTGGTGTAGTAGGCGTTGTCGAACGCGGTGGGCGTCGTCGTGTCCAGCGGCGCCAGGTTGCC
GTCGCCGCTGCCCGTCGGCCGCGGGCAGCTGGCCTTGAGCGCCGCCGCGAAGGCGGCGTCGATGTTGGTCTCGTTGTAGAGCCTGTCGCGGAAGTTTTGG
CACTGCGCCTGCCCGACCGTGTGCGCGCCGGAGAGCGCCACCATGTCGGCTTGGCTCAGCCCCTTGGCGGCGAACGAGGCGGTGAGGTTGGCGACGTCGA
AGGACGGAGGTGGCAGGTCGCTGTTCGCCAGCGCCAAGCTCGCCGTCGTCGAGTCACGCCTCCCGAGAAGAACCCTCCATGACGGCCCACCCA