Detailed information on CNT30694712


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102488Oryza sativaOryza rufipogon10042100260forward

Expression of CNT30694712

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MWIGGTIATRSKRNRRWGASTTIKQMWPIISKIRRRWHSL*

>peptide 2 (48 aa)
LPSDCPLVQVDHKKKKGHMKQEVLLVDHIHTASQDVDRGHHSYQIQEE*

Sequence

>CNT30694712
CCTCCCATCGGACTGCCCATTGGTCCAGGTTGACCATAAGAAGAAAAAAGGCCATATGAAGCAGGAGGTCCTACTGGTGGACCATATCCATACCGCAAGC
CAAGATGTGGATAGGGGGCACCATAGCTACCAGATCCAAGAGGAATAGGAGGTGGGGTGCCAGCACTACCATAAAACAGATGTGGCCGATCATATCCAAG
ATCAGGAGGAGGTGGCACTCTCTGTAAAGCATGCAAGATTTAGTACAGAAATATTTCTCC