Detailed information on CNT30694684


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102596Oryza sativaOryza rufipogon82.7493.3399.71350reverse complement

Expression of CNT30694684

Peptides detected in this lncRNA

>peptide 1 (43 aa)
LGFIATKGAFEKKNNRWFYKAMQYVWSFYGLVYDDGWCIMPNT*

>peptide 2 (55 aa)
MVYHAKHLTGARARVEPSVLPKFWFKLFVPYCYFSSVVTVRHAECSRIVAKVGVY*

Sequence

>CNT30694684
CGTTAGGCTTTATTGCGACTAAAGGTGCTTTCGAAAAAAAAAACAATAGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTTCTACGGGCTCGTATA
CGATGATGGATGGTGTATCATGCCAAACACTTAACTGGAGCCAGGGCACGTGTTGAGCCATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCCT
ATTGTTATTTTAGTTCTGTAGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGGCAAAGGTAGGTGTGTACTAGGATAAACAGATAAGGAACACCGA
GCTAATCTATGCTATTCCAAAAGAGGTTTTGTGCTGTCACAAGCTTTTGTGGTCTCTGAAGCTGAACTGAACTAAAAAAGTAGTGATATTGGAAGCTTGA
GTTCGACCCAACTTAGGTGAGTT