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Detailed information on CNT30694663


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597001Oryza sativaOryza meridionalis56.0331.298.96288forward
CNT30101646Oryza sativaOryza rufipogon55.6421.1599.3286forward
CNT30117617Oryza sativaOryza nivara13.2321.8694.1268forward

Expression of CNT30694663

Peptides detected in this lncRNA

>peptide 1 (33 aa)
LDPCPCCSVSSFIRQFQGGESYLDSLRSLLQMM*

>peptide 2 (58 aa)
RSLSVLLRVLFHSSVSGWRILFRQPQKLASDDVKSYSVFSGNTLSLLSSPNVKNSTPL*

Sequence

>CNT30694663
CTCGATCCCTGTCCGTGCTGCTCCGTGTCCTCTTTCATTCGTCAGTTTCAGGGTGGCGAATCCTATTTAGACAGCCTCAGAAGCTTGCTTCAGATGATGT
AAAGTCCTACTCGGTATTCAGTGGGAATACTTTGAGCTTATTGTCTTCTCCAAACGTGAAGAACTCAACTCCACTATAATTCATGGACTTCTTCATTCCT
GCAAAATAGGCAATCGCGAGAGTAGATCAGACTCAAGATTAGGTACTTCTAAGTTGTCGAGTTTGGGGGAGGTTCCACCACGCTTTCGTACCTCTGAGAT
ATATGGAACATTATTTTGATATGGGATAAAAGTAATTCCTTGCTCATGTATTACTGTGGTTTGTACTGATTGTTGAAGGAACCTTAGGCCAATTATCATG
TCATCATTAATCATTGACAAATCTCTTATTGTAATCTCATCTATTATATATTTAGTTGCATTAATGTAAACCTCAATATTATAAGCTAACTGATTATGAA
TTTTCTTTATTCCG