CANTATAdb - search

Detailed information on CNT30694476

BLAST search results

BLAST vs Swiss-Prot:
sp|Q01401|GLGB_ORYSJ, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30516695	Oryza sativa	Juglans regia	16.86	26.61	81.61	174	forward
CNT30189679	Oryza sativa	Secale cereale	64.73	99.26	89.37	668	forward
CNT30688548	Oryza sativa	Triticum urartu	62.11	98.92	88.92	641	forward
CNT30102166	Oryza sativa	Oryza rufipogon	39.15	72.53	100	404	forward

Expression of CNT30694476

Peptides detected in this lncRNA

>peptide 1 (36 aa)
ITFWSAMPRLMVGEAGCKSDMPVYISLSIKRNAIVL*

>peptide 2 (47 aa)
MAIARRKSNPTPPSSTGRQSTGMPETSSATIVASGKSLCIKWFASIM*

>peptide 3 (29 aa)
MCLLLALHHSSPHEPHRCVEHQVLEVEDA*

>peptide 4 (35 aa)
MVCEHHVNNCIHIGIQTEILLVVSSKSLIDTMVMV*

Sequence

>CNT30694476
AATAACCTTTTGGAGTGCAATGCCACGGTTGATGGTAGGTGAAGCAGGCTGCAAGTCTGACATGCCAGTGTACATTTCCTTGTCCATCAAGAGAAATGCT
ATAGTCTTATAATGGATAACTATACCTGATCATGGCTCTCGGCATAGGCAATGCATTTTTCTGTATATCTCCTGTTAGTCAAAGTTTGCACTATTTCACT
CATTGACCATTTGCGGTCCTCTTTGTTCTTCAGGTAGTCAATCCATCTATCAGGAATGGCCATTGCCAGGCGGAAGTCAAACCCTACTCCACCTTCATCA
ACTGGCCGACAAAGCACTGGCATGCCCGAAACATCTTCAGCAACAATAGTTGCTTCCGGCAAGAGTTTATGCATTAAATGGTTTGCGAGCATCATGTAAA
CAATTGCATCCACATCGGTATCCAAACTGAAATACTCCTTGTAGTTTCCAGTAAATCCCTTATTGATACCATGGTGATGGTATAGCATTGATGTAACCCC
ATCAAATCGGAAGCCATCAAACATGAATTCGTCCATCCAATATCTCAAATTAGAAAGAAGAAATCTTAAGACCTCCCAATTGGCATAGTTGAACAGACGA
CTATCCCAGAGTTTATGGTAGCCCCTATCTCCTGTATGAAAATAAGACTCATGAGTGTTTTGTCCAACGTCATAGCCATTTAGACCATCGGTCACATTAT
TACTCGCATGGCTATGGACAACATCCATCAGAACTCGTAATCCTAAACTATGTGCCTTGTCAACAAGATATTTCAGATCCTCTGGTGTTCCTGATCTGCT
GCTGACTGCGAAAAAATTTGTCACGTGATACCCAAAAGAAGCATAGTAGGAATGTTCCATGATTGCCATTAACTGAACTGTGTTGTAGTTATTTGCCCGT
ATGCGTGGTAACACATTGTCTGCAAATTCTCTGTATGTGCTTACTTCTGGCTCTTCACCACTCATCCCCACATGAGCCTCATAGATGCGTGGAGCATCAG
GTTTTGGAGGTCGAGGATGCTTAAACACGTAC