Detailed information on CNT3069429


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703590Quercus suberQuercus lobata88.1918.9599.55224forward
CNT30362772Quercus suberSorghum bicolor37.441.388.4295forward

Expression of CNT3069429

Peptides detected in this lncRNA

>peptide 1 (36 aa)
RFLSRVLVNWFLSRVLVNWLRAGGTLSLCLRILFFL*

>peptide 2 (83 aa)
KVLVEGFGELVLVEGFGELVESWWDLEPLLEDPLLPLKLNSLRPFDESGQISLRWQSPTDPKLLRTLLEQWVQHLLRLLLRCCC

Sequence

>CNT3069429
CAAGGTTCTTGTCGAGGGTTTTGGTGAACTGGTTCTTGTCGAGGGTTTTGGTGAACTGGTTGAGAGCTGGTGGGACCTTGAGCCTCTGCTTGAGGATCCT
CTTCTTCCTCTGAAGCTGAACAGTCTTAGGCCATTTGACGAATCGGGTCAGATCTCTCTTCGGTGGCAAAGCCCCACCGATCCCAAACTGCTTAGGACGC
TTCTCGAACAATGGGTTCAACACCTTCTCCGTCTTCTTCTTCGATGCTGCTGCT