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Detailed information on CNT30694258


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30586994Oryza sativaMusa acuminata17.5127.7688.14118forward
CNT30461281Oryza sativaSaccharum spontaneum23.2910.3284.71157forward

Expression of CNT30694258

Peptides detected in this lncRNA

>peptide 1 (69 aa)
EGCTVGDALPPRRPAPADRRRGRRDRRRVGLAALVVGPPDHAPVEPAELIVAGRRPPRLLGAEGVVVAS*

>peptide 2 (48 aa)
KGARWGMPFLLDGRHRLIGGVVGVIGAVLDLLPSSSDHRIMPRSNRPS*

Sequence

>CNT30694258
GAAGGGTGCACGGTGGGGGATGCCCTTCCTCCTCGACGGCCGGCACCGGCTGATCGGCGGCGTGGTCGGCGTGATCGGCGCCGTGTTGGACTTGCTGCCC
TCGTCGTCGGACCACCGGATCATGCCCCGGTCGAACCGGCCGAGCTGATCGTAGCCGGCCGCCGCCCTCCTCGCCTTCTTGGGGCTGAAGGAGTCGTAGT
AGCTAGCTAGGGGTACCTTGCAGCCGAGGGAGCAGAAGCGGAAGGAGTCGGGGAGGCTGCGGCAGCAGATCTCGCAGGTGTTGGTGACGCCCTTCCCGGG
CCTCGCCTGCGGGCGGCCGTTGAGGAACACGATCTTGGCGCTGTTGATCACGTACGTCTGCACGTGCGATATGTCGATCAGCTTCCCCACCTCCGACACC
CTGATCACGTTGTGACGAGGAAGAAGAAGACTAGATGGTTATTACCTGGACGACGTGGTGGTCGCGGTGGGCGGGGAGGCAGTAGGCGCAGAGGGCGTCG
CCGGTGCAGCCGAGGCAGAAGAGGTTGCACTCGTTCTTGCTCAGCTCCGGGTGCGACGCGCACGCCACAAAGAAGCTCGTCGACAGCAGCGGCCGCAGCC
ACGGTGGCCCCATGTCCTCCTCCGTCTGCTGCGCCGCCGCCATCGCCTCGCCGCCACCGCCGTCGTCCGGGCTC