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Detailed information on CNT30693922


BLAST search results

BLAST vs Swiss-Prot:
sp|P69310|UBIQ_AVESA, E-value = 5e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674769Oryza sativaSetaria viridis23.1226.2296.9129forward
CNT30591107Oryza sativaMusa acuminata23.1242.1691.47129forward
CNT30246600Oryza sativaAvena sativa28.3226.1694.94158forward
CNT30367865Oryza sativaSorghum bicolor29.7530.6892.77166forward

Expression of CNT30693922

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MVSEDSTSSVMVFPVRVFTKICILAAAGEGSPPRLRRREGWGEG

Sequence

>CNT30693922
GGAGAACAAAACGCATATAATCTGAATAACATGTAACCAGCAGCAGCTCATCTCAGCTCATGATAATAACAGATAAAAGGGAATGAAAAGCATCAGATCA
GAGCAAAGCGAGCAGCAGCAAGCATCAACCTAGGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCACTTGCCGCAGTAGTGGCGATCGAAGTGGTTGGCCA
TGAAGGTGCCCGCGCCGCAGTCGTTGTTGGGGCACTCCTTCCTGAGCCTGGTGACCTTGCCGGTGGCGTCGTCCACCTTGTAGAACTGGAGCACGGCGAG
CTTCACCTTCTTGTGCTTGTGCTTGATCTTCTTGGGCTTGGTGTACGTCTTCTTCTTGCGCTTCTTGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTC
CTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGGCG
GCGGCGGGGGAGGGGTCGCCTCCGCGGCTGCGGCGGCGAGAGGGGTGGGGGGAAGGTG