Detailed information on CNT30693909


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ASR1|EF2_ARATH, E-value = 3e-151

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3071371Oryza sativaQuercus suber8.4741.8181.67120forward
CNT30405832Oryza sativaBeta vulgaris15.427.1879.36218forward
CNT30636551Oryza sativaCapsicum annuum11.3724.3980.75161forward
CNT30192963Oryza sativaSecale cereale9.1824.3483.85130forward
CNT30224842Oryza sativaHordeum vulgare6.9222.3789.898forward
CNT30441049Oryza sativaAegilops tauschii10.9541.0184.52155forward
CNT30361828Oryza sativaSorghum bicolor10.9529.9283.23155forward
CNT30706279Oryza sativaPrunus avium13.5631.6378.65192forward
CNT30119815Oryza sativaCitrus clementina8.6226.5886.07122forward

Expression of CNT30693909

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MQRAGWTSLDKLQHTGESIRLIKCPLPALLSL*

>peptide 2 (37 aa)
MASISNNQYIPNVVLIAHNAVKFFRCDHHHVDLLHVSL

>peptide 3 (55 aa)
FTLVNVEFFLINWSEVNTYTMFPQEEPSTNSLLSPIQIRELLMHLIYKSFLSPIP*

>peptide 4 (59 aa)
MLSRSTPKFPTQCLCAFSGEGMWYIIISESALHAGSQAWITYFTSSMPTSSLAGELTVT*

>peptide 5 (65 aa)
MVNVVKIHTKIPNTMSLRLLWRGDVVHHHLRKCTACWQPSLDHILYEFNANKFLSWRTHSDMNLF*

Sequence

>CNT30693909
CCTTCACACTTGTCAATGTAGAGTTCTTCTTAATTAACTGGTCTGAAGTAAACACATACACAATGTTTCCACAAGAAGAACCCTCAACTAACTCCCTTTT
ATCTCCTATCCAAATAAGGGAACTCTTAATGCATTTGATATACAAATCTTTTCTTTCACCAATACCATAGCTGGGACTCAAGAATTGGACATTCATTCCA
GATGTGACTTTCCCGGAGAAGACACGTCCTAAAGCAAAATACCTGCCTTTGCCTAATGCTAGGGTCATCTTGGAAACATAAAGAACAAGGGGCCCTTCAG
CATCACAATTTCTAACAGAGGTATGGTAAATGTTGTCAAGATCCACACCAAAATTCCCAACACAATGTCTTTGCGCCTTCTCTGGAGAGGGGATGTGGTA
CATCATCATCTCAGAAAGTGCACTGCATGCTGGCAGCCAAGCTTGGATCACATACTTTACGAGTTCAATGCCAACAAGTTCCTTAGCTGGAGAACTCACA
GTGACATGAATCTTTTCTAGCATAGGCCACAATTTGTGCTTGCTATTCATGCAGGCGTTCATGATCTCTCTGATAGGTTCATAGCAAAACTGAACAAAGC
CCCTCTTGCATGTAGCTGTGCCAGTGTTCTTTTTTGTCCATTTCTTTGTGGCCAGGTCAAAGAAGTTCTCACCCCATAATCTGTCTATCATCTTAGATTC
CTCAACTTTGAATTTGGAGGAATACATCTTAGCAAAATTAGAAATTGCAACTGCCCATCCGTGCAGACCAGATGAGAACACAACAGTTCCCTTAGTGGGA
TACACCTGAGCATCTTTGTGTGAAGACATGGTAGCATTGACACTATCAATTAGACTGGAGAGGGTCTGATAAGCTTTCTCACCATCAACATTCTGCTCAA
GGAAGAATCTGTCGATCTTATTCAGAGTAAAAACAGGCTGAATCTTCATATTAAGAGCCTCACGAATAGAAGTCTTGGTCCATAAAGTAACACCCTCAAA
ACTGTCCACTACAACTAGAGCACCATCCATTATGCAAAGGGCAGGTTGGACATCATTAGACAAGTTGCAACACACAGGAGAGTCAATAAGATTGATCAAG
TGTCCGTTACCAGCTCTCTTATCCTTGTAGCTTCTCAGAGAATCTTCAGGCATTTCATAGTACAGAGAAATTAGGCTATTGCTTTCAGTAACTTCCTGGG
AAATGCCACGTCGTAAATGTGAGAATTAATGTAATTTCATAAACAAACAAGTAAAACAACCACATTTTAAGAATCTCACACCACTACATTTCAATCTTAC
CATGGCCAGCATCAGCAATAACCAATACATTCCGAATGTTGTTCTTATTGCACATAATGCTGTGAAGTTCTTCCGCTGTGACCACCATCATGTCGATTTA
CTTCATGTATCCCTGC