Detailed information on CNT30693878


BLAST search results

BLAST vs Swiss-Prot:
sp|Q948U0|RBOHA_SOLTU, E-value = 4e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552202Oryza sativaOryza glaberrima11.9736.5387.71236forward
CNT30574959Oryza sativaOryza barthii11.9774.2187.71236forward

Expression of CNT30693878

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSKSMSSRSNCNRQCDNLICLCYHQMVRLC*

>peptide 2 (29 aa)
MLFRRSFSMLMKGVAPIPSPISKRMSYFL*

>peptide 3 (39 aa)
MITFSNIIHHAFKPFKGTLLSGDPVEISSSWPIALKGAA*

>peptide 4 (37 aa)
MNNAILRIAHKESTHILFQFSWMKSTVLLKRLCIGLR*

>peptide 5 (44 aa)
MNTQVVISRCRKTIRWYHSKGETSGHFTNIYIPLLYLKLDGLFM*

>peptide 6 (42 aa)
MYGYEHSSSHLQVQKDDQMVPFKRRNIWAFYKHIHPTFVLET*

>peptide 7 (48 aa)
MFMLSSNGTTLLSAVDRSLVSVFRHTGRSITAMFSLSVSAAPFAMQTQ*

>peptide 8 (48 aa)
KWEKPCCQRRYPHHFWHVEVIGPWQSELILHLLLHTRLSGNFRLSSTS*

Sequence

>CNT30693878
AAGTGGGAAAAACCTTGCTGCCAGAGACGATATCCACACCATTTTTGGCATGTTGAAGTGATTGGACCATGGCAATCAGAGCTGATCTTGCATCTCCTTC
TTCATACACGCTTGTCAGGTAATTTTAGACTGAGTAGTACATCATGATCACTTTCAGCAACATCATTCATCACGCCTTTAAACCATTCAAAGGAACCTTG
CTCTCTGGTGACCCAGTAGAAATAAGCTCTTCCTGGCCCATTGCTCTTAAAGGTGCAGCCTAACTCAGCATCATGCGTGCTTTGCACATCCTCAGTTTAC
TCCATTGGATTTTATGTTGTTCAGGAGATCCTTCAGTATGCTGATGAAAGGCGTTGCTCCAATTCCAAGCCCGATAAGCAAAAGAATGTCATATTTCTTG
TAATTTTGAGCTGGTGCGCCGAAAGGACCATCTATAAAGACTTTGGGAAAGCTAAATGAAGAGAACCAAACTCCCATTATGCCTGAACTATTCTCCTTTT
CTTTTTGTTTCTGTTTGCTCAACTGACCTTCCCAAATAGGTTTCTAAGTTCTGTTGTCCAGTCACCTAATGTACGGATATGAACACTCAAGTAGTCATCT
CCAGGTGCAGAAAGACGATCAGATGGTACCATTCAAAAGGCGAAACATCTGGGCATTTTACAAACATATACATCCCACTTTTGTACTTGAAACTTGATGG
TTTATTCATGTGAATAGAGAGCACATTTCCAGGGTAAATTGCTGCCTGCATGGCACATTTGATAGTCAATTAATGGTATTCTTGTACACTTAGAAGCTAG
AATAAATTGAAAATACTCATCGTGCAATTCATAAATACCGTTCGATTGTACCACTGCTTGGTGAGAAATATGAAGTAGGAGTGCAGCACCAAGAGGATAT
ATGCAATCACCAGTAGGTGATGGGCGTACCAAAAGGCATTGAAACCAGCAAGGTGGTGCAGTGGTGATGGAAGCTTCACAACGCTCCTCCTGAACGAATG
TGTCGCAAGTGTGAACGAGAATGACATTATCAAGATCATGAGGATGCCAGTCCACCCTGGAGTGCTTGCAACCAGCGATGAGTATGTTGGTTGAACATAG
TTGAAGTAAGGCCCCAGTGTGGCCTCGAACTTGTCCCTTGGACATGATACCAATCTTGGGAAGTCGCAGGTTACATGAGCAAGAGTATGAGTAGCCGCTC
CAATTGCAATCGTCAGTGCGATAACCTGATATGTTTATGTTATCATCAAATGGTACGACTTTGCTGAGTGCTGTTGATCGGAGCCTTGTTAGTGTGTTTC
GGCACACCGGGAGGAGTATAACGGCCATGTTCAGCTTGAGTGTTTCGGCAGCACCCTTTGCTATGCAGACACAGTAGCCCATCACCTGAAATGCATCCCG
CCTACTGTACTGCACAAACTTGTACATGAATAATGCAATATTGAGGATCGCCCACAAGGAGAGCACCCATATCCTCTTCCAATTCTCATGGATGAAGTCA
ACAGTCTTGTTGAAACGCCTCTGCATTGGACTCCGGTGACTGGAAGGGACCATTGTCCTTGCAAGGCTTGCTGAAGCCAGCTTCACCTTCTCTGGAGGCC
CTTGGGCTGTCACCATACCACGGAGTAGCATAATTTCATGTCTTGGTACCTCAATGTAACCGCGATGATCAGGATCCAGCTCTTCCATGATCAGTGAGGC
GTAGGTTGCAGCATGGCTTTTCAACTTGGCAAGTTTGTTTGCTGCGGCACTCAACACAATAACCTGCATATGGAAAGAGAAAGGTAAATTCTTATTGAGA
TCATTTCCACAAGCTTTAATATTCGTAGTCGTGAATCAAAGTTCTGATCAGTCAACTCCTCCCAAAATTCTTTCAGCTGTTCCTTTGTTATCCCATCTTC
TGGTTTGATGCTCCTCCTTCTCGCCAATGCCACAAACACCTCGCTTGCAAACTCCTTAGAATCCGCCATACC