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Detailed information on CNT30693767


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT004881, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100035Oryza sativaOryza rufipogon18.7734.288.55131forward

Expression of CNT30693767

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPRNGTGKPIFLNFLSWKMIVTFFLHNSRCVCTLIV

>peptide 2 (86 aa)
NRSPPIVWGDRSPVRIFVPVVAPPLYQSAERPMPSPSTPVHLWYQGPSADELRGTGHLAAPTPRFSVISPPVACPRCAWSRAPTLV*

>peptide 3 (66 aa)
TDHHRSCGAIVRPLGFSCRWWRRPSTRAPKGQCRPPQLPSTFGIKVPAPTNYVAPDTSLPPRRDSR*

Sequence

>CNT30693767
GAACCGATCACCACCGATCGTGTGGGGCGATCGTTCGCCCGTTAGGATTTTCGTGCCGGTGGTGGCGCCGCCCCTCTACCAGAGCGCCGAAAGGCCAATG
CCGTCCCCCTCAACTCCCGTCCACCTTTGGTATCAAGGTCCCAGCGCCGACGAACTACGTGGCACCGGACACCTCGCTGCCCCCACGCCGAGATTCTCGG
TGATCTCCCCGCCGGTCGCCTGCCCTCGTTGTGCGTGGAGTCGCGCGCCGACCCTCGTCTGATTTGGAATCGGAGTCGTCGCCACCTCTCCATTTCATTC
AGTGAATGATCTGTTGATATTTCCGCATCTGAATGCATTGCCGTCAGCAGAGGCCACATATGAAGACAGTGCCATGATTAAGTAAATCCTTTTGTGCTGA
AGTTTTTACAGACTCAGGGAACTCGACAGAAGATTAGTGTGCTGGTTAGAGACATGAGTGGATTTTTCAGTCCAGCCTATTGCTTTTAATTAATCGAAGA
GTTCATAGTTTCCTTCAACAATAATATCAAAGAGTCCATTGGTGGATGGTCACTGGCTATTGTTGTCTGTTGGCCTATATATTTTTTGATGCCTAGAAAT
GGAACTGGAAAACCAATATTTTTGAATTTCTTATCTTGGAAAATGATTGTCACATTTTTTTTGCACAATTCTAGATGTGTGTGCACATTAATTGTAAA