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Detailed information on CNT30693762


BLAST search results

BLAST vs Swiss-Prot:
sp|Q5WMW5|XIP_ORYSJ, E-value = 9e-106

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370346Oryza sativaOryza glumipatula80.2385.7100755forward
CNT30101724Oryza sativaOryza rufipogon34.8638.1100328forward

Expression of CNT30693762

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MKKSMPSTTASPKGRATPGRPPPRKATRMPLDWQCLMSGPTAETVWPEMSSL*

>peptide 2 (79 aa)
FQSNKTKYIQHITQKKVSLPVLITSLYLCITLHYPTHTHTHTPIFYHIISIFICACTSHDITYFICARTSSSSCMNPVK*

Sequence

>CNT30693762
TTCCAATCCAATAAAACAAAATACATACAACATATCACCCAGAAGAAAGTAAGCCTGCCCGTCCTGATCACCTCACTTTATTTGTGCATTACATTACATT
ATCCAACACACACACACACACATACCCCAATCTTTTATCATATCATTTCCATCTTTATTTGTGCATGCACGTCACATGACATTACTTACTTTATTTGTGC
ACGTACTAGTAGTAGCTCGTGCATGAATCCAGTGAAGTGATCAGTGATCAAAGTGAAAATGGATCAAGGTCTGGCTCATTACCAGCCGTCCATCCGGTCT
TCTTGTCCCAGTACCTGTTCCAGACCATGATGCCCCCATAGTTGGGCAGCTTGTTGATGAACTGCAGCACGTCGTAGTAGAGATCCTTGTGCGACACGTA
GCCGTCCCTGTCAGCCTCCGGCGACGCGACGACGCCGACGAGGACGCGGCTCTGCGGGTACGCCGCCATCCACTTCTCCAGCTCCTCCCTCCTCGACGCG
CACCGCCCGTCGCCGAACACCTTGACGTGGATCCGCGAGAAGAGCCCCGTGGACAGCGCCGCCTGCAGCCGCTGGTCCGGGAACACGCACCTCGCCGTCG
CCGTCAGCATCACCCCGAGCCTCCCCTTGTAGTCCTTGTTGTGCGCGTACAGCCGCCGCGCCAGCTCGTCGTAGTGCTCCGTGGCGCCCTGGTCGATGAA
GAAGTCGATGCCGTCGACGACGGCGTCGCCGAAGGGGCGGGCGACGCCGGGGCGGCCGCCGCCGAGGAAGGCGACGAGGATGCCCCTGGACTGGCAGTGC
TTGATGTCGGGGCCGACGGCGGAGACGGTGTGGCCGGAGATGTCCAGCTTGTAGGTGCCCGGGATGTAGCCGAAGGCGCTGAGGAAGGAGATGATGACGG
TGGTGTAGAGGCCGGTGTCGCACGCCTCACGGAGGGACCCC