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Detailed information on CNT30693746

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30553785	Oryza sativa	Oryza glaberrima	37.88	68.04	99.19	247	forward
CNT3067432	Oryza sativa	Leersia perrieri	35.74	32.63	86.27	233	forward
CNT30596221	Oryza sativa	Oryza meridionalis	40.64	51.96	98.87	265	forward
CNT30109966	Oryza sativa	Oryza longistaminata	40.64	50.19	98.49	265	forward
CNT30101607	Oryza sativa	Oryza rufipogon	38.5	31.34	100	251	forward
CNT30576506	Oryza sativa	Oryza barthii	37.88	49.4	99.6	247	forward

Expression of CNT30693746

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MLLHRPSHQTEDKLKMSSSCISSFCNKTIFMRILVVIALLLLALGVLPFAPHSHSETSNTSRKSRYILISGCNNYCSVACCYCNIHR*

Sequence

>CNT30693746
CTGGATTTCTCAAATCGTTAACAAATGATGTCCATTGGTTACCGAAGGGAGTGAGTTAGTGCATGGCTGCACTACTTCTTGGCCCCCTCCTAACCCTAAC
CTGCTAAGACAAGTCTGAATATATAGCTTCAGTTAGGTAGTACATAAATAGGCACCATTGCAAGCCTGATGCTGCTACACCGTCCAAGTCACCAAACTGA
AGATAAGCTGAAGATGTCGAGTAGCTGTATTAGCAGCTTTTGTAACAAGACCATCTTCATGAGGATACTTGTCGTTATAGCTTTGCTTCTACTGGCCCTT
GGAGTTCTTCCCTTTGCACCACATTCACACAGTGAAACTTCGAACACCAGTCGAAAATCTCGGTACATTCTTATAAGTGGTTGCAACAACTACTGCAGTG
TGGCATGCTGCTATTGCAACATTCACAGATAGGTTTACCTCACGAAGAACGAGACCTCCTGCAAGGAGTAAGCTAGATGTGAGAGTACAAGCCTGAAGAA
CCGCATTCCTTGGGGCAACTGTGAATTTCTCGTCAGTAGTAACATCATTGGCATTGACCTCAAGGCTGGTGGTGGGGTTTTCGCCACTGCCTGAAGAAGA
AGCTTCTTCACTTATAAATGTTGGACCTTGAGATATACTTTGTGATTTCCTC