Detailed information on CNT30693708


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0DG05|PSAH_ORYSJ, E-value = 2e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672419Oryza sativaSetaria viridis31.3944.2291.28172forward
CNT30520974Oryza sativaSetaria italica33.7622.4891.89185forward
CNT30178523Oryza sativaSecale cereale24.4523.8985.07134forward
CNT30435258Oryza sativaAegilops tauschii34.1265.8586.1187forward
CNT30657122Oryza sativaTriticum dicoccoides33.7635.3785.95185forward
CNT30130810Oryza sativaLolium perenne33.7635.7183.78185forward
CNT3010486Oryza sativaZea mays22.2613.4189.34122forward
CNT30679870Oryza sativaTriticum urartu33.7625.7384.32185forward
CNT30720193Oryza sativaTriticum spelta34.1234.2586.1187forward
CNT30338878Oryza sativaEragrostis tef35.582587.69195forward
CNT30582819Oryza sativaEchinochloa crusgalli24.0915.8189.39132forward

Expression of CNT30693708

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MAIRPWGTSSTVQRICMDGSDQEEGEAETRNLI*

Sequence

>CNT30693708
GGAATAGTACAATTATATCAACATCATAAACAGGGGGAATTAATCCATGGCGATCCGGCCATGGGGGACTAGCAGTACAGTACAGAGGATTTGCATGGAT
GGATCGGATCAAGAAGAAGGTGAGGCAGAGACGAGGAATTTAATTTAGATCTTGCCGCGTGGGCCGGGCGTCGGCGGCAGCTGCGGGCCCTTCTTGATCG
GAAGCAGGTCTGGCGACGCCGACGCGCTGACGTAGGCCACCAGCGATCCGCCGCCGAGCAGCAGGAACTTGAGCAGGAGCCCCCTCTTGGTGAAGGGCCC
CGCGAACGTCTCGAAGAACTTGCTCTGCATCGATCACCCACACGAATTATTCAGTAAATTAATCATCGAGCTAAGTATATATTTTAGTCAGGTAATACTA
ACCTGGAGAGGGTTGTACGGCGACGGCGCGTCGGAGCCGTACAGGCTGGACGGCGACGAGGGACGCCATTGCTGCGGTGAATTCGCGGGAGGACGCAAAG
CTGAGTAGATAGATGGATAGATAGCCGGTGTACTATCTGCGGCGGCGG