Detailed information on CNT30693580


BLAST search results

BLAST vs Swiss-Prot:
sp|B9FK36|ACC2_ORYSJ, E-value = 2e-144

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676402Oryza sativaSetaria viridis10.4262.389.47152forward
CNT30522223Oryza sativaSetaria italica29.1333.1380.47425forward
CNT30367325Oryza sativaSorghum bicolor12.2758.584.92179forward
CNT30574162Oryza sativaVitis vinifera25.7736.7977.93376forward
CNT30101687Oryza sativaOryza rufipogon10.925.85100159forward

Expression of CNT30693580

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MPAQSWLQNLETTLVQHEEQIAHGNQADQGQQG*

>peptide 2 (30 aa)
MFVRKYQLCSFNITLGIFNTFRSTRGTRGP*

>peptide 3 (92 aa)
MQQVCPVGPTVLLLEVVHQCRLVKTLYAPDAKSSKISSYSNSSSSHKCKCKCLLICPRISTGNSSTSMYILHTKSIFLAHNRINNPPNFTTV*

>peptide 4 (39 aa)
MNRGNPSRLKSSNACAVLVAESGNHTCPARGTDCSRESS*

>peptide 5 (42 aa)
FAFRSINVGSSRLMQSWSSSDLNLISINPCGSRTLPFAVLSA*

Sequence

>CNT30693580
GTTTTGCTTTCAGATCAATTAATGTTGGGTCAAGCCGACTCATGCAATCCTGGAGTTCCTCTGACCTGAACTTGATCTCAATTAACCCTTGCGGTTCCAG
AACATTGCCTTTTGCAGTCCTCTCAGCATAGCACTCAATGCGGTCTGGGTTTATCTTGCTATCAACCACAACCCAAGCCCCTCCTCGTAGCTCTGCAGCC
ATGGGAATGTAGACAAAGGCAGGCTGATTGTATGTCCTAAGGTTCTCAACAATAGTCGAGCCAGCCTGAAGAATTCCTTCAAAAAGATCTCTTTGTCCAC
CAGAGAAGCCTCTCCAGTTAGCGAGGATGAACAGAGGTAATCCTTCACGGTTGAAGTCCAGCAATGCCTGCGCAGTCTTGGTTGCAGAATCTGGAAACCA
CACTTGTCCAGCACGAGGAACAGATTGCTCACGGGAATCAAGCTGACCAGGGTCAGCAGGGATAGTTTGCATCATGGTCTGAGTCTCCACAGCTATCACA
CCCACTGGAATTCCACCAAGCTTTGCTCTGCCAGTAACCACTGTCTTAGCCCAACCTTCAAATGTTTCCACAAAGCTGTCTTTATCAAACATACCACCTA
ACCATTTCCCTTGGCTGTCATCAACACCACGGATAGCCGCTCGAGGATCACACGAGTTCTCAGGAATGTATGCAACAGGTCTGTCCGGTGGGTCCAACGG
TGTTGTTACTGGAAGTGGTCCACCAATGTAGGCTGGTCAAGACGCTGTATGCACCGGATGCCAAGTCGAGCAAGATAAGCTCCTATTCCAACAGTTCTTC
CAGTCACAAATGTAAGTGTAAATGTCTCCTTATATGCCCTAGAATAAGCACTGGCAATAGCAGCACTTCCATGTATATTCTCCACACCAAGTCCATCTTC
CTTGCCCACAACAGAATCAATAACCCACCTAATTTCACCACTGTCTAGCTGCATCTTATGTGCTATGACAGAAGTGCCAATACGAGCATAGTCTTCTTCG
CTTAGATAAATGTACTGAAACCCACGTTCAGGGCTGCCATCATCAGACCACCCAACACGGAAGCAAGATTTCACTTCATCTGCTATGCCAATTCGAGCAC
CAGAATTTGCTGCCAAATAAATAAGAGGAAGTTTCTTCTCACAGGCTAGGTTGGTAACAGCTTCAAAAAATGCATCTTCCCTTGGGCCAAATGATCCAGC
TCTGAACGTAATATCATTTGCAACAACAATAATCTCCCTACCACTAGGAAATTCAGGAGTGGACATCTTCAAGGTCCAAGCTACCATACCAATGTCATTG
AGCCCAGCAGGCCGGTCCATTTGAACTAAAGGAGTGCCCCATGACCCATGTTTGTCCGCAAATACCAACTCTGTAGCTTTAACATAACATTGGGCATTTT
CAACACCTTTAGAAGCACCAGAGGTACTAGAGGACCATGACTTCCTCACTGCAGTTTCA