Detailed information on CNT30693577


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SBI0|RBOHB_ARATH, E-value = 7e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406849Oryza sativaBeta vulgaris21.2625.0883.9581reverse complement
CNT30220737Oryza sativaHordeum vulgare61.1541.7688.41233forward
CNT30661171Oryza sativaTriticum dicoccoides25.988.2287.8899forward
CNT30101878Oryza sativaOryza rufipogon92.6582.28100353forward

Expression of CNT30693577

Peptides detected in this lncRNA

>peptide 1 (32 aa)
LAHLLHRLFQEDRSGKNLAARDDIHTIFGMLK*

>peptide 2 (42 aa)
MAIRADLASPSSYTLVRRSFSMLMKGVAPIPSPISKRMSYFL*

>peptide 3 (30 aa)
WLTYSIGYSRRIEVGKTLLPETISTPFLAC*

Sequence

>CNT30693577
GTTGGCTCACCTACTCCATCGGCTATTCCAGGAGGATAGAAGTGGGAAAAACCTTGCTGCCAGAGACGATATCCACACCATTTTTGGCATGTTGAAGTGA
TTGGACCATGGCAATCAGAGCTGATCTTGCATCTCCTTCTTCATACACGCTTGTCAGGAGATCCTTCAGTATGCTGATGAAAGGCGTTGCTCCAATTCCA
AGCCCGATAAGCAAAAGAATGTCATATTTCTTGTAATTTTGAGCTGGTGCGCCGAAAGGACCATCTATAAAGACTTTGGGAAAGCTAAATGAAGAGAACC
AAAGTCAGGAAGATTAGTGAAACAATTGTATAGAAATTCCTTCAAAAAGTAGATGAATGTAGAATATGAAACAAACAGGGC