Detailed information on CNT30693543


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30101676Oryza sativaOryza rufipogon98.3182.5599.43350forward

Expression of CNT30693543

Peptides detected in this lncRNA

>peptide 1 (36 aa)
GGINPWRSGHGGLAVQYRGFAWMDRIKKKVRQRRGI*

>peptide 2 (33 aa)
MAIRPWGTSSTVQRICMDGSDQEEGEAETRNLI*

Sequence

>CNT30693543
GGGGGAATTAATCCATGGCGATCCGGCCATGGGGGACTAGCAGTACAGTACAGAGGATTTGCATGGATGGATCGGATCAAGAAGAAGGTGAGGCAGAGAC
GAGGAATTTAATTTAGATCTTGCCGCGTGGGCCGGGCGTCGGCGGCAGCTGCGGGCCCTTCTTGATCGGAAGCAGGTCTGGCGACGCCGACGCGCTGACG
TAGGCCACCAGCGATCCGCCGCCGAGCAGCAGGAACTTGAGCAGGAGCCCCCTCTTGGTGAAGGGCTGGACGGCGACGAGGGACGCCATTGCTGCGGTGA
ATTCGCGGGAGGACGCAAAGCTGAGTAGATAGATGGATAGATAGCCGGTGTACTAT