Detailed information on CNT30693511


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000969, E-value = 2e-103

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30101405Oryza sativaOryza rufipogon99.6217.8598.49265forward

Expression of CNT30693511

Peptides detected in this lncRNA

>peptide 1 (45 aa)
RPREPRIQVKAKTRKTSSKKWEMKPRRIPMPIIRREMKTMASSRS*

>peptide 2 (43 aa)
ETEGAADPGEGQDPQDLEQEVGDEASEDPYAYYQEGDEDDGVQ*

Sequence

>CNT30693511
GAGACCGAGGGAGCCGCGGATCCAGGTGAAGGCCAAGACCCGCAAGACCTCGAGCAAGAAGTGGGAGATGAAGCCTCGGAGGATCCCTATGCCTATTATC
AGGAGGGAGATGAAGACGATGGCGTCCAGTAGGTCTTAGCACGGTCGTTGCCTGTGGCAATGGCATGCCGCTGCCTGAATTCCGCTGCCTTATCTATTTC
TGCTTTTGGATGTATTCCGGACCTCTCGGTCCGATGATTTAAGGCTATGCCTGCGGGCCTATGATG