Detailed information on CNT30693503


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673224Oryza sativaSetaria viridis16.0523.6492.3152forward
CNT30435404Oryza sativaAegilops tauschii23.1515.590.6775forward
CNT30370272Oryza sativaOryza glumipatula81.7936.699.62265forward
CNT30116541Oryza sativaOryza nivara49.3873.0699.38160forward

Expression of CNT30693503

Peptides detected in this lncRNA

>peptide 1 (34 aa)
AEVGEVPRGDAAGDGALVAERVGALDGELAGGGG*

>peptide 2 (30 aa)
MANSQVEEDESSSSPVSSVAVKSPVVASSV*

Sequence

>CNT30693503
GCGGAGGTCGGTGAGGTGCCCCGTGGCGATGCGGCCGGTGATGGCGCGCTGGTAGCGGAGCGAGTAGGAGCCCTCGATGGCGAACTCGCAGGTGGAGGAG
GATGAGTCGTCGTCGTCGCCGGTGTCGAGCGTCGCCGTGAAGTCGCCCGTGGTGGCCTCGAGCGTGTAGGAGGTGACCCCCTTGGGGAGGATGCCGACGG
GGAAGTCGTAGGACTCCAGGACCTCGTACGCCGTCGGCTTCTTCTCCGCCGCCGCTTCCGCCGCCGCGGCGGCGACGGCGAGGACGGCGAGGAGGAGGAG
GAGGGGCACACGAGGCATGGCGGA