CANTATAdb - search

Detailed information on CNT30693452

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30596960	Oryza sativa	Oryza meridionalis	24.95	34.16	96.64	357	forward

Expression of CNT30693452

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MNWPSWSSPPLVELHWRYMVEHWRCCPQWHIIRIRITRRRH*

>peptide 2 (41 aa)
MAYNKDKDNPAAALNKNSMTCLVDDDMEVNAIVSVNDQIAP*

>peptide 3 (37 aa)
MVWIVWFISVLTFLITACRDVRIFRGDSAEISNNFRT*

>peptide 4 (29 aa)
MSWYRLRTFCLRTLQLHLQKILAHHETPL*

>peptide 5 (29 aa)
MRPHFDGNYFRSPCLHLPSLLSSLARFLP*

Sequence

>CNT30693452
TAATACCCCGAGTTTTAAATTAATATATCTCGCGGAATATTAGAGCAAACGCGCAAAAGTTCAACTTTTAAACCATTGTTCGTATAGGCGATCGGGAACC
GTGGATGCGTAGAGCTCGCCGAGCAGTGCAAAATAGACTATAAATTTATAGTAATCGGAGTCCGAACGAAGTCCCGAGGATTGAATAGATGTGAGCTGTT
AGATCTTATTTAGTCTCTTTATATAACCAACCAAAAAAAACAAACGAAAAAAAAAGAAACAGGAGCGATTCTCCTGTAGCCCTAGCCGCCGCACCTCCTG
CGCTCTGCCGCTGCCGCTGCTGTTCCTCTCTTCGCCGGCGCCGCCGCTGGTGCAGCCGTCGCCGGTCGCCACAACCGTCGTCGTCCGCAGCCGGTCGTTG
GAAGGACGGAGAGAAGGCAGAGAAGAACAGGAAGGAAGGAAAGAAGGGGAAATTTGATAGAAGAAGGGAAATTTGGGGAATTTGGTACCTAATGACATCG
ATCGGCATGGGGCGGGAGTAGCACCCTTGGACTACACATTATTATTGCACACAATTGAAATTAGTTTTAGACTATAATTTTTGCTCAGCATAAGTTTTGC
ATAGAACTTGTAAAGGTCATTTAAGGTTCTGATCCTTATTTTTCACGTGGGATTTGTGGAGCTAGGATGGTTTGGATTGTGTGGTTTATATCGGTATTGA
CCTTTCTTATAACTGCCTGTCGTGATGTCCGTATTTTTAGGGGAGACTCTGCCGAAATTTCTAATAATTTTAGGACTTAGTTTTTGAGTGTATTTTGGTG
TGGCATTCTAGATACGTGGTTACCTGGGGTGTTACAAAACCGGCCGACTGCGATGAGCTGGTACCGGCTTCGGACTTTTTGCTTGAGGACTCTCCAACTT
CATCTCCAGAAGATATTGGCACATCATGAGACCCCACTTTGATGGTAATTACTTCCGAAGTCCTTGCCTCCACCTCCCTTCCCTCCTTTCTTCATTAGCC
CGGTTCCTACCATAAAACCGGCCATTGTTTGGTGAAGCCAAACGCTCATGAATTGGCCTTCTTGGTCCTCCCCACCCTTGGTTGAATTGCATTGGAGGTA
TATGGTTGAACATTGGCGGTGTTGCCCCCAATGGCATATAATAAGGATAAGGATAACCCGGCGGCGGCATTGAATAAGAACTCCATGACATGTCTTGTGG
ATGATGATATGGAGGTGAATGCGATCGTCTCGGTGAATGACCAAATCGCTCCCTAGGAGGTGATCTTGGTCTTTTTCCTTTGTTGCGAGCCTTCTCACCA
CCTTGCTTCTCATACTTCTTCAAAAGCATATCAAAAGTCACTTTGGTCTTCCTAGGGGCTTTAGAAGTTGAAGCTTCATTCTTATTCTCCTTCCAAACAC
CATCCTCCGGCTTCTTTGGCACTATCATCTT