Detailed information on CNT30693450


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370178Oryza sativaOryza glumipatula9.7349.392.28246forward
CNT30110772Oryza sativaOryza longistaminata15.5169.7595.66392forward
CNT30101691Oryza sativaOryza rufipogon88.9695.4699.822248forward

Expression of CNT30693450

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MTHPNIVAMLIICGACQSVNSFAVKFDQEAQLQHPVWSIPFCIG*

>peptide 2 (39 aa)
ILLDICHQISFPNICRFSDRRICAKIGAHAGVGMQLRHV*

>peptide 3 (65 aa)
MAEMKSNDFFWLHLTVHCLLVLHFFTSPLYICFCYNSNKKLICAFLSYSEQQQPAWLHFFLLYSE*

>peptide 4 (61 aa)
MHFPSSFRTSAACMLAYFLFFIMNESLQYCTYLVKVDSCIHYLPEACHFASPTPIYFLLEN*

>peptide 5 (79 aa)
MCNQTAPVVKCGLSLSNFGLRAFLSVAILFSALFSLSFFHSFFSFLFIVFSGERERAGLPACAKERACRCARERSRSPW*

>peptide 6 (65 aa)
MWVIPVKFRAPRFSVRSHFVLSSLLALFLSLFFFFSLHCFLRRERESWLAGVCEREGLPMRAREK*

>peptide 7 (31 aa)
MAGFFFFCLVTELGFVAGRWGFFLCDLHFSE*

Sequence

>CNT30693450
ATTTTGCTAGATATTTGTCATCAAATTTCTTTCCCTAATATTTGTCGTTTTTCTGACCGTAGGATTTGCGCTAAGATTGGTGCGCATGCGGGGGTAGGGA
TGCAACTGCGTCATGTGTAATCAGACCGCGCCTGTAGTCAAATGTGGGTTATCCCTGTCAAATTTCGGGCTCCGCGCTTTTCTGTCCGTAGCCATTTTGT
TCTCAGCTCTCTTCTCGCTCTCTTTCTTTCACTCTTTTTTTTCTTTTCTCTTCATTGTTTTCTCCGGAGAGAGAGAGAGAGCTGGCTTGCCGGCGTGTGC
GAAAGAGAGGGCTTGCCGATGCGCGCGCGAGAGAAGTAGGTCGCCATGGTGATTTAGCTCGCCGGAGAGTTTTCTGCTGATTTCTCTCTCCTTGTCTCCT
ATTCGTTTGCATCATTAGTTGATTTTTTTTTTCAATCTTATTCCAGCTAGGTTTTGATGCTTCAGGTAGCTCTTAATGTTCGGATCTGATGTTTGTTTAA
CTGTTTTAGATTTTGGAATCGGTATAGGTCTTGGTTTAGTCCCCTGATCTGTTGATTTCTATGTCATGGAACCTAAACACGCGGAGCACCTCCGTCCTGC
CCTTGTTTTGATTAGTCCCCTGATCTATTGAATTCTATGTCATGCCGATGAGATTGCCTAGCTGTTGATTTTTTATTTTGTTAAGTTCCAGGTGAGTAGT
GCTCTGATCTGTTTATTTATAGGTAAAGCTACACACTATTTGAAATTTTCTAGGTCTGATCTGTTTTTTTGAAGTATATCTGCTTTGTGTGATTTGAGAT
TAGACTAAATCGTAACCACCGAACTAGCCATCGGTGGAAACGATGGCTGGATTTTTTTTTTTTTGTCTTGTCACTGAGCTCGGATTTGTGGCTGGTAGAT
GGGGATTTTTTTTGTGTGATTTGCATTTTTCGGAATAAATTGGACATGCTTTTGGCAGATTTACAGGTTTGCTAGCATCTTTTTCCCCCTCTGTTTTGTT
CTGTCCTGTAGAGGGGATTTTGTTTTTTTTCCTCTGTTCTTAACATGCACGTCTCCTTCTGTGTTTGTTAACAATAAATTGTAAATGTGTCCACCTTAGA
ATATCAAAAGCTTTTACCATGTTCTTTGTTTTATGAAACAAAGCAGTGTCAGTTATACACCTAAATCTTTCAGCTGGTTAAGTTGCAAGCACCTTTAAAG
CTCCATTCATTGTGTCTTATACGATAGAACCAATGAAGATCCCTTCTACAGTACAAACTTGATTGAGCAACCCTGTGCAGGCTGCAGCAAGCTCACATCT
AAACTGTGCGTTGATTAAAGATATAGGTTGTGTTCAATTTGCAAAACAAGATGATGTATGATTTCCATGTGCTTCTGTTACGATTCCCTTCTGTTATTGT
TCTAATATAAAGTTCAGATGCACTTTCCTTCATCATTTAGAACATCAGCAGCATGCATGCTTGCATATTTTTTATTCTTTATTATGAATGAATCATTGCA
ATATTGTACTTACTTGGTAAAGGTTGATAGTTGTATACACTATTTACCTGAAGCTTGCCATTTTGCTAGCCCCACACCCATATACTTTCTCTTGGAAAAT
TAATACAGCAAAAGTGATTAAGTTTTTTTAGCAATTAGAAGTTATTTATGTCTTTTGACTAAGTCCTTGAACATCCATTGGTCTACACTAGTTTGTTGTA
ATCAAGTTTTGTGAGCAATGGCAGAAATGAAGAGTAATGATTTTTTTTGGTTGCATCTAACTGTGCATTGTCTACTAGTGTTGCATTTTTTTACTAGCCC
TCTTTACATCTGTTTTTGTTATAATTCTAATAAAAAGTTAATATGTGCTTTCCTGAGTTATTCAGAACAACAACAGCCTGCATGGCTGCATTTTTTTCTT
CTTTATTCTGAATGACCCATCCCAATATTGTTGCCATGTTAATTATTTGTGGAGCCTGTCAGTCAGTTAACTCTTTTGCTGTGAAATTTGATCAAGAGGC
TCAACTACAACACCCTGTTTGGTCCATTCCCTTCTGCATCGGCTGACTTGTCATATGAAATTTTCTACGAAGATCCTGGTCAAAAAAAAAAAATTCTACG
AAGATCACATATGATGCATAATAATAGGTGCTGTTTAGGCAGAAGCTGAGTTTCATGGTGGCATTTCAAGCTCAACATATGAGATGTGCTCGTTTGATCA
AATCGGTTGTTAAAGGTATTAGAGCAAATATCACTGATTGATACATGTCTTCTCTGCAGTGATTTCTGACAGATGTTTTCTCCTTGAATGAGCTTGTAAA
ATTCTTTACCAATTTTTGTGAGATTCCATTTTGTTCTCTCTATGCACACATGCCACAATGAAAAATGTTAATGAAGTTCTGAGTTAGTAATGGCCTAGTT
TTGTACTGTGGAATCTGTTTTCTACACTAGTATGAGTATTTTTTTTCTTTTTCTTTTGTATGGTTCCGACCATTTGTATTGTGTCAAAAGTTTTGAATGA
TAATTTCGTGTCTAATTTCTATTGGGC