Detailed information on CNT30693320


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002494, E-value = 9e-157

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596562Oryza sativaOryza meridionalis1130.7889.62318forward
CNT30578379Oryza sativaOryza barthii14.9784.5791.92433forward
CNT30117510Oryza sativaOryza nivara5.3370.3291.56154forward

Expression of CNT30693320

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MVVSLTWRLHGSVDLVFISRCRRLMSRLRYLHGMGIIGTRVYARLR*

>peptide 2 (35 aa)
MTSLGGANGPNSTAAGLLALPFFFPGLACRSARGA*

>peptide 3 (39 aa)
MEQLTVLTFYQKDIYTPSPIFIHSLCFCPQLSSSLHINA*

>peptide 4 (48 aa)
MSPRMSRENITGSAFHPSCRRRLVESREERGIVKTLSSVSRYLLGVKR*

>peptide 5 (48 aa)
MARTRRQLACWHCPSSSLAWPADQHEELEHLVRLQPAPRWRLVAGVGR*

>peptide 6 (55 aa)
MMQRQRRLRTPKVEAKPPFGQHPLGRRRLALSPPPPIPLPAARSPPPGSHPLPTT*

>peptide 7 (60 aa)
LKMRGGDKVEEERGVKGEEEVPRSDRAHLSDLRVDLYSRLVLPTGTINRSLVPVGVTNRE*

Sequence

>CNT30693320
GTTAAAAATGAGAGGAGGAGATAAGGTTGAGGAGGAGAGAGGAGTTAAAGGAGAGGAGGAGGTACCTCGATCCGATCGTGCACACCTCTCCGATCTCCGC
GTCGATCTTTACTCCCGGTTGGTTTTACCAACCGGGACTATAAATAGATCTTTAGTCCCGGTTGGTGTTACCAACCGGGAGTAAAGCGTATGGCGATCTT
TTTTCCCGGTTGATGTTATCAATCAGGACTACAAATAGATCTTTAGTCCCGGTTGGTAACACCAACCGGTACTAAAGATTGAAAAGTATCCTGTAGCTTT
TAAACCGGGACTAAAGATATTTTTAGTCCTGGTTTTTAATACAACCGGGACTATTGTAAAATCTGGTCGACCGACCAAAGATGGTTTCTCCACCAGTGAA
GATAACAATGCCTACCTAATACCGAGGTTTCCCAAATCGCCGGGGCGCGGTAGGGTTACCGCGCCCCGGCGGTAAGCACAGTTACCGCGCGATAACCACG
GTAACCGTAAAAAACCGTACAAAACCGTGCAAAATTTATCAAAAATTCAAATTATTTTTTAAATTTATTTGAATTAAAGGAGGTTACCGCGGTATTTATA
TTACCGTACCCCCGCGGTAAGCCCGGTAACCGCGCGGTTATCGGCGGTAAGGTAAACCCTGCCTAATACACACCGCATGTAATACAAACTACAAATTAAA
GCCTGCCCGACCATTGCATCGAGATTTGGGCCATGAACTCGGCCCAATAACTATTTTAAATGGTATAAGTTCACTTTGACTCTCTTAACTAGAGTGCGAA
TATGATTTGAGCCAATTTCGTTTATTCCCTTACTTTCATCTCCAATATTAATTTTACCCCTACTTTTAAGGGTTTTCGTTTTTACCCACACTTTTTTGAA
CCGAACAATCTTTTTGCCCCTATTTTAGATGGAGCAGTTAACGGTGTTAACTTTTTATCAAAAGGACATTTATACCCCCTCTCCCATATTTATTCACTCA
TTGTGTTTTTGCCCCCAATTATCCTCCAGTTTACATATAAACGCATAATAAGGGTGAAGTAAATCAAGATTATTGTGCCATTCTTCCCAAATCCCAACAG
GAGTAAAGATTTGGTAATAAGCTGACGTGGTTGGAGCAGCAAGCTGCAGCTTGTTTGGTTCAACCTCGTTTTCTTGTTCTTGATGTTGTCAGGAACATCT
GGGGTGGTAGGCGTCACCTCGAACGGCTGGGAGAGTGGGAGGACGAGCCGGCGAACTGGCTGAAGCCCAGCTGCCGGCCGGAGATGACCAGCTTGGGCGG
CGCGAATGGCCCGAACTCGACGGCAGCTGGCCTGCTGGCACTGCCCTTCTTCTTCCCTGGCTTGGCCTGCCGATCAGCACGAGGAGCTTGAGCACCTCGT
CCGTCTCCAGCCTGCACCGCGGTGGCGCCTTGTTGCCGGCGTCGGCAGATGATGCAGCGGCAGCGCCGCCTACGAACGCCGAAGGTGGAAGCGAAGCCAC
CGTTCGGCCAACACCCTCTCGGCCGCCGCCGCCTAGCCCTCTCCCCGCCGCCGCCTATCCCTCTCCCCGCCGCTCGCTCCCCGCCGCCAGGCAGCCACCC
GCTCCCCACCACCTAGCCGCCACTCCCCGCCACCTACCCTTCCCCTGCTCGCCGGTGGGAGGAGCTGCATTCCCCGTGACATTGAGTCACTGACGTGTGG
GGCCCATGTGGGTCCAGGCACATGTAGGTCCCACATGTCAGTGACTCAATGTCACCGAGAATGTCACGAGAGAATATCACTGGATCTGCGTTCCACCCTA
GCTGCCGCCGCCGCTTGGTAGAATCGCGAGAAGAAAGAGGAATCGTGAAGACTCTCTCCTCTGTTAGTAGATATTTGCTAGGGGTAAAAAGGTAACACAC
AAATTCGAAAAAAAATTATTTCCTTTACTTCTCTAGTTTTTTACTGCCATATACTCGGTCCCACTAACTTCCATCCAAACCAGGGGTAAACGGATTGTTC
GGTTAAAAAAAGTGGGGGCAAAAACGAAAACCCTAAAAGGTAGGAGTAAAATCAATATTGGAGAAGAAAGTGAGGGTAGAAACGAAATTATCCCATATGA
TTTGTATCCCTGAACCACAATACCAGATATCTCGACCCCTTAACTATTAAAACCGGTGGAATCTGACTTCCTCTGTGGTTTTAGATGGTTGTTTCGCTGA
CGTGGCGCCTACATGGCAGTGTTGATCTAGTCTTCATTTCACGTTGTCGACGTTTGATGTCTCGACTACGGTATTTGCATGGCATGGGGATCATTGGTAC
TAGGGTATACGCGAGACTGAGGTAAAAGAGATGGAGACGAGGATTTTTATACAGGTCGGGCCCCTGAATTGTTAGGTAATAACCCTATATCCTGTTGGCC
GAAGCCGGTATTGCTCTTATTCATGATAATCACACCAGTACAATATTTGGGGTAGCCTATCTAACTATTGTCGACATGGCGGTCTGACGATCTGACTCGT
AGTCGACAACAGGGTAGCCTTTCTCCTCGAATCCGTGCCCGGCGAGATCAGAGATAGCGCTTTCGTCTCTCCTGACAGTATCCGGAGACACCGTAGGATA
CTAGCCGTGCTTATCCCTGAAGTCGATATCCGGCGGCGTGTCTTGGCGTATGTAGGCTTTTATGTTGTGGCTTCTATGTCGATTGTGTTGGGTGTTCCTC
GTCCTCCTCTCCTCCTAGGGGGGCATGTATTTATACCCATAGGTGTCCCCTTGTTCAAGTAGAACTAGGGAAACCAATATGGATACATTCCGAGTAGTCC
TTGTCGTTTCCATGTAGAACTCTGGTTGTCTTTCCTTGTCCGGAACTCCTCCTATATTTGCATGTTGTTTCCGTATAGGATATGGTATGTGG