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Detailed information on CNT30693262

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30101316	Oryza sativa	Oryza rufipogon	67.36	98.89	100	357	forward

Expression of CNT30693262

Peptides detected in this lncRNA

>peptide 1 (61 aa)
TTDRNFYITIFKFKYSHYFSSQSKYITPDLTYTQVQFSTSNHWLNSGVRVIHISPAPRINF*

>peptide 2 (30 aa)
AQPIEIFTSQYLNLNIHIISVPRANTLHQI*

>peptide 3 (47 aa)
MTAIFISTSPALTTLSASFAAPRRRSGASASFLPLAPPPRTTPRKAK*

Sequence

>CNT30693262
GCACAACCGATCGAAATTTTTACATCACAATATTTAAATTTAAATATTCACATTATTTCAGTTCCCAGAGCAAATACATTACACCAGATTTAACTTACAC
CCAGGTGCAATTCAGCACATCTAACCACTGGCTAAATTCTGGGGTGAGGGTCATCCATATTAGCCCTGCACCCAGAATTAATTTTTGACACTGAAATCAG
CCTACCAATTAACACCTATATAAATTTATGTACAATGCCCAATATTTCCTACCTCACCCCGGTAGGACAAGAATTTACAGTCCGTAATCCGTAATGTATA
TTCACAAAACAACACAAACCCTATTCTGCTCTTCACAAGGCAAGCGCCTTGTACCATTGTCCATGGACCTTCTCTGATATGACTGCCATCTTTATCAGCA
CCTCCCCGGCCTTGACAACCCTGTCGGCGAGCTTCGCCGCGCCGAGGCGTCGCAGCGGCGCTTCGGCTAGCTTCTTGCCCTTGGCGCCGCCACCGAGGAC
GACGCCGCGGAAGGCAAAGTAGACCGCCCG