Detailed information on CNT30693215


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XLR1|PIP26_ORYSJ, E-value = 1e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30504332Oryza sativaNicotiana attenuata10.8320.1285.5169forward
CNT30289517Oryza sativaTriticum aestivum42.8649.3789.38273forward
CNT30387764Oryza sativaTriticum turgidum42.8630.7889.38273forward
CNT30589490Oryza sativaMusa acuminata18.6841.0389.08119forward
CNT3085870Oryza sativaVigna radiata15.0721.8785.4296forward
CNT30553402Oryza sativaOryza glaberrima62.0175.53100395forward
CNT30436608Oryza sativaAegilops tauschii51.1845.3488.96326forward
CNT30657898Oryza sativaTriticum dicoccoides42.8637.3588.64273forward
CNT30228928Oryza sativaAnanas comosus16.4826.9292.38105forward
CNT30653715Oryza sativaRosa chinensis21.1923.1685.93135forward
CNT30214941Oryza sativaHelianthus annuus12.0930.284.4277forward
CNT30680357Oryza sativaTriticum urartu23.8653.5287.5152forward
CNT30596194Oryza sativaOryza meridionalis61.5490.1199.23392forward
CNT30370054Oryza sativaOryza glumipatula62.0175.5399.24395forward
CNT30109688Oryza sativaOryza longistaminata60.2872.45100384forward
CNT30331328Oryza sativaDioscorea rotundata42.8653.2281.32273forward
CNT30101372Oryza sativaOryza rufipogon62.0152.39100395forward
CNT30576241Oryza sativaOryza barthii62.0159.58100395forward
CNT30116534Oryza sativaOryza nivara62.0191.44100395forward
CNT30113851Oryza sativaFicus carica9.7322.3896.7762forward
CNT3065055Oryza sativaSelaginella moellendorffii12.7221.9583.9581forward

Expression of CNT30693215

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MPPKAQAMPRVPTPPHWSADDCTLYPMTVATVMYRNRSVAMNSAMSAR*

>peptide 2 (53 aa)
MTAAPMLRAGLMPVPVMGMVARCTMNTANPMGSGASTYTNKHVSYVVLVKLAS*

>peptide 3 (61 aa)
VVPCLLLVVDDGGADAPGRVDARAGDGDGGQVHHEHGEPDGQRREHLHKQACKLRSTSKAG*

Sequence

>CNT30693215
GGTCGTCCCATGCCTTCTTCTGGTTGTAGATGACGGCGGCGCCGATGCTCCGGGCAGGGTTGATGCCCGTGCCGGTGATGGGGATGGTGGCCAGGTGCAC
CATGAACACGGCGAACCCGATGGGCAGCGGCGCGAGCACCTACACAAACAAGCATGTAAGCTACGTAGTACTAGTAAAGCTGGCTAGCTGAGACGGACCC
TGGAGAGTACAAAGGTGGCGTGGTGTGATTATAAAGATACGTACCGGGACGTGGGAGTCGCGGGCATTGCGCTTTGGGTCGGTGGCGGAGAAGACGGTGT
AGACGAGGACGAAGATCATGCCACCGAAGGCCCAGGCGATGCCGAGGGTGCCGACGCCGCCGCACTGGTCGGCGGACGACTGCACCTTGTACCCAATGAC
GGTGGCGACGGTGATGTATAGGAACAGGAGCGTGGCGATGAACTCCGCAATGAGCGCCCGGTAGAAGGACCACAGCCGGAGCTCGCCGACGTCGAACAGC
GGCGCCGGCGGCGGGTCGGTGTAGTCCTTGGGCCGCACGTGCTCCGGCTCCTCGCTCACCTCCTTCGACATTGCCGCTCCCTTCAGCAAGCTCAACACGC
TACTCACTCTGAGCTAGCTTAGCTCTGCTCTCTCTTC