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Detailed information on CNT30693141


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30116528Oryza sativaOryza nivara75.2581.84100374forward

Expression of CNT30693141

Peptides detected in this lncRNA

>peptide 1 (99 aa)
MHTCKCAMERRQIERTVRRVPLGAASARGGGPASSPPPCAPRPGDAGTSAPRSRSTPPRTAPAQGPRRPPRRRPAPGQGSPRRGWSRTWRWAGESRAAVA

>peptide 2 (29 aa)
MCNGTPANRAHGPASAARGGVGSWRWPCE*

Sequence

>CNT30693141
GCGTCGATGATCAGGTAATGAAGCAAATACAGCATAACTATACTGCACCTTGACAAGCAGTGCGTTTATTGTAACACAGATATATATACTCCCACAGTTT
CAAACTTTCAATGGCACAATCGCGTACACCGCGACTTAGAATTTGCAGGTTCCTTTGACGAGTTTACGATACCGGTAGTTATTACTACAGTAAACATGCA
CACCTGCAAATGTGCAATGGAACGCCGGCAAATCGAGCGCACGGTCCGGCGAGTGCCGCTCGGGGCGGCGTCGGCTCGTGGCGGTGGCCCTGCGAGTAGC
CCACCTCCGTGCGCGCCACGCCCGGGAGACGCTGGTACGTCAGCTCCACGCTCCAGAAGCACCCCGCCGCGAACTGCGCCAGCTCAAGGCCCTCGCCGGC
CGCCGCGTCGGCGTCCGGCCCCAGGGCAGGGTTCGCCGCGCCGGGGTTGGAGTCGGACATGGCGATGGGCGGGGGAGTCGCGGGCGGCGGTGGCCGA