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Detailed information on CNT30693097


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 4e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553399Oryza sativaOryza glaberrima27.8435.0697.35189forward
CNT30116432Oryza sativaOryza nivara27.8424.3298.41189forward
CNT30603955Oryza sativaOryza punctata21.518.5598.63146forward

Expression of CNT30693097

Peptides detected in this lncRNA

>peptide 1 (95 aa)
MATGRTRLTPSALALMAVQRQSAASRSATPDSSGQQVSLALAPTTACTSPFSASTHASSFSVFTGHFPERGDGNAAVLGGGGGHGDLALDVSWGA*

Sequence

>CNT30693097
CTCCATGACACAAGTCAGAGCTCATGTATATATGCTACATATGTCACTATATATATTTATATGTATATAGCATAGCCAGGTGATAAACTATACTTATTAA
TTATGCAGTAGGTGATTATTAATTAATTAGTGATCATACATAATTGAGGTGATTTATGATGGGCACTGGAAGCTGGAGGGGACGTGCTTGCCGCACTCGT
TGACGAGCACGGAGATGGCAACGGGGAGGACGAGGCTGACGCCGAGCGCCTTGGCCTTGATGGCGGTGCAGAGGCAGAGCGCGGCGTCGAGGTCGGCGAC
GCCGGACAGCAGCGGGCAGCAGGTGTCGCTGGCCTTGGCGCCGACCACCGCGTGCACCAGCCCGTTCAGCGCGTCCACGCACGCCAGCAGCTTCAGCGTG
TTCACCGGGCACTTCCCCGAGCGCGGCGACGGCAATGCGGCCGTTCTTGGCGGCGGCGGCGGCCATGGCGATCTCGCTCTCGATGTCTCTTGGGGGGCTT
AGCTATAGCTAGCTGGTGTGCGAGGGAAGAAGACGAGCTGGGAGCCTGGATTTATAGGCCATTGGTGGAGGCGAGAGGCCGTCACTGAAGCTAGCTAGTG
ATGGACATGGAGCACGCTAGCTAGGTAGAGCTTGGCGTGTCACGTCGCGCGCGGTGGCGAGGATTGTGGCTGGCATGCA