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Detailed information on CNT30693051


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENJ7|PSBA_ORYNI, E-value = 0.0

BLAST vs NONCODE:
NONMTRT000175, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30441777Oryza sativaAegilops tauschii41.7498.7697.3556forward
CNT3018289Oryza sativaZea mays90.4746.4496.271205forward
CNT3067750Oryza sativaLeersia perrieri19.3796.6397.67258forward
CNT30683192Oryza sativaTriticum urartu51.3567.5297.66684forward
CNT30147990Oryza sativaBrachypodium distachyon72.2263.5494.18962forward
CNT30577776Oryza sativaOryza barthii14.9426.8299.5199reverse complement

Expression of CNT30693051

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MISAQVLITRPWLSTTDWLKLNPFRLKAIVLIPKAVNQIPTTGQAAKKKCKERELLKLAYWKINRPK*

>peptide 2 (42 aa)
MSGHNIISLFLLTKSVTLISRFVFSGFPDQTRGYQGTMHSTE*

>peptide 3 (62 aa)
MQQQSKDAYPDGNSVPTHDPYNKLHQVRSVEQLAHKDHHCITTHQQMQLPKLGKSAIRSPQK*

Sequence

>CNT30693051
AAAATTGCTATATGTTAGCAGAAAAGCCTTATCCATTAAGAGATGGAACTTCAAGAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCAT
TACTTCCATACCAAGATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTACAGATTGGTTGAAATTGAATCCGTTT
AGATTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTAAAAC
TAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATAAGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTC
GTTTTCAGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGCTACACCTAACATGTGA
AATGGATGCATAAGGATGTTATGCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGAC
CAATAGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCA
CTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCACTCATCAACAGATGCAGCTTCC
CAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGAAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAATAAAGAACCAGAAACAGGCTCACG
AATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCG
ATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGTTGCAGAAGCGACCCCACAGGCTTGTACTTTCGCGTCTCTCTAAAATTGCAGTCATGGTAAGATCTT
GGTTTATTCAAATTGCAAGGACTCCCAAGCACACGTATTAACTAGAAAGATAATAGAAGGCTTGTTATTTAACAGTATAATATAGACTATATACCAATGT
CAACCAAGCCAGCCCCGACAGTTGTATATCCATACAACAAAATTTACCAAACCAAAAAATTTTGTAAATGAAGTGAGTGAAAAATCAAAACTCAGATTGC
TCCTTTCTAGTTTCCATATGGGTTGCCCGGGA