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Detailed information on CNT30692903


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001792, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30108528Oryza sativaOryza longistaminata44.299.5498.63656forward

Expression of CNT30692903

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MFHYSGCSVYIIQEPCVAMGVQFGSLFMILEKR*

>peptide 2 (31 aa)
MHKSCVCFTSSRLYLLSILYSLLCLIWFLDT*

>peptide 3 (42 aa)
MLVIRVSTHIQIHVSLFRMFCLHYSRTMRSHGSAIWIFIHDP*

>peptide 4 (37 aa)
MVWIVWFISVLTFLITACRDVRIFRGDSAEISNNFRT*

Sequence

>CNT30692903
CCGTGTTCTAGAGTATGATTGGGCGAATTCGAGGGCGAATTCGATCGAAGGGGGGAAGAATGTAATACCCCGAGTTTTAAATTAATATATCTCGCGGAAT
ATTAGAGCAAACGCGCAAAAGTTCAACTTTTAAACCATTGTTCGTATAGGCGATCGGGAACCGTGGATGCGTAGAGCTCGCCGAGTAGTGCAAAATAGAC
TATAAATTTATAGTAATCGGAGTCCGAACGAAGTCCCGAGGATTGAATAGATGTGAGCCGTTAGATCTTATCTAGTCTCTTTATATAACCAACCAAAAAA
AAAACAAACGAAAAAAAAAGAAACAGGAGCGATTCTCCTGTAGCCCTAGCCGCCGCACCTCCTGCGCTCTGCCGCCGCCGCTGCTGTTCCTCTCTTCGCC
GGCGCCGCCGCTGGTGCAGCCATCGCCGGTCGCCACAGCCGTCGTCGTCCGCAGCCGGTCGTTGGAAGGAGGGAGAGAAGGCAGAGAAGAACAGGAAGGA
AGGAAAGAAGGGGAAATTTGATAGAAGAAGGGAAATTTGGGGAATTTGGTGAATATTTCCAAATTCTTCGTTTTTCTTATACATTAGTACTGCTAGGTGT
GGAGGGTTCCAACGTTGGAGGAGTTGAGTCGGAGTATCGAATGAGTTAAGGCAAGTACAAGACGGACTTATATGATGGACAAAACTGAGTTGTTTTGTTT
GGCTTTACTTGCATAATTATTATTCAATTGCTTGTTATTACTGATTGTATGGCTATGACGTTATGCTAGTTATTCGTGTTTCGACCCATATTCAAATTCA
TGTTTCATTATTCCGGATGTTCTGTTTACATTATTCAAGAACCATGCGTAGCCATGGGAGTGCAATTTGGATCTTTATTCATGATCCTTGAGAAGCGCTG
ATCACGCTTGCTCGGCTTACCGGTAATGCTAAGAGGATATTCACACCTGCCCGGGAGGGAACTACTATCTTTTGACTTCTTTTGTTTAAAAATAAAGTAA
ATCCAACCCTTCATGTTGGTTTCTTAATGCATAAATCATGCGTATGTTTTACTAGTTCAAGATTGTACTTGCTGAGTATTCTTTACTCACTCTTGTGTTT
AATTTGGTTTTTAGATACCTAATGACATCGATCGGCATGGGGCGGGAGTAGCACCCTTGGACTACACATTATTATTGCACACAATTGAAATTAGTTTTAG
ACTATAATTTTTGCTCAGCATAAGTTTTGCATAGAACTTGTAAAGGTCATTTAAGGTTCTGATCTTTATTTTTCACGTGGGATTTGTGGAGCTAGGATGG
TTTGGATTGTGTGGTTTATATCGGTATTGACCTTTCTTATAACTGCCTGTCGTGATGTCCGTATTTTTAGGGGAGACTCTGCCGAAATTTCTAATAATTT
TAGGACTTAGTTTTTGAGTGTATTTTGGTGTGGCATTCTATGTACGTGGTTACCTGGGGTGTTACAGTTGGTATCAGAGCGGGC