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Detailed information on CNT30692900


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT001124, E-value = 9e-81

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371170Oryza sativaOryza glumipatula33.5931.9493.97398forward
CNT30110050Oryza sativaOryza longistaminata2799.6995.31320forward
CNT30101249Oryza sativaOryza rufipogon39.8347.3998.31472forward

Expression of CNT30692900

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MESDLPHPCLYKASPSRPLPFASSLSRSRCL*

Sequence

>CNT30692900
AATTATTTGAGCAAGTAAAGTATTTTTAATAAATGAAACATTATTTCACTAATTATTTTAATTGAAAAAGTTTTTAAATCTTCCCCTAAGCCGTTGGGCT
GATTCCACCTCATCTCCCTCCTTTAGGTGCGCAGCTGTGCAGCCCAAGTCAGCCCAGCCGAGCTTCCCCTTCTCTTTCTTTCTTTGTTTTATTTTCAGCC
AGCCAAAACTGAAAGTCTACTTTGCCTCCCTTTGCACTGTTCTTCTTCAACCTCTGGCAGCCGATATGAGACCGAGTTGGTTCGGTTTTTCTCCTCCAAA
TCCGGCCTTTTCTCTTGTGTTTTCCTAAAATTAGTTGAGGGGAAATATTTCCCTTATCTCCCTCTTTCGTTTCCCTCAAAAACCGAAGTTTAATTCCTTG
TATTTTACCCGAATCAAATTCGTTTTCGAGTTTATTTCTCCAAACTAACCATCGGATTTTCCGGCTCAAATCCTCTCGTATGGAGTCCGATCTCCCTCAC
CCATGCCTATATAAAGCATCCCCTAGTCGTCCTCTTCCGTTTGCCTCAAGTCTTAGCCGCAGCCGTTGCCTGTAGCGCCGCCGCCACGTGAGCCCTAGCG
TCGCTGCCGCCGTCGCTGCTTCAGCCGCGCCGCAGCTGTGGTCGCCGCTGCCGCCTTCCGTCGCCACCGTCGGGTTCGCCAGGTGGAGGAGCATCCCGTC
CGCCCCTTCGCCGCTGCTGCATCTCGCGTGAGCGCCGCCGCCGACATCAAGCCGAGCCGTGCCGCTGTCGGAGCTCGTCGCCGGTCGTCGTTCGTCGTAT
TTCTTTGCACCGTTTCCGACGTTCCGGAGGAGAGCGTTTACGTTGAGGAATGTTCAGAAGCGTTTGAAGAAGATCAAGAGAAGGAGTACTTCAGTGAAGG
TGATGATCAGGAGGATTAGGCTTTGTTCGGGTCAAGTTGCTTGTGGAGTGGAGTCGCCATAGCTGTTTAGTCTTTTGTTTATTTTCCGCTGCGTAGAATT
TTATTCTTTTGAGAGGAACTATCCACCTCTGTAATAATTTATTATTTTGCGAATATTAATTAGCTGTTTGATAGTACTCTATTATCAATTTGTTATTGTG
TGCCTCGGCTGATTCCTGGACGAGGATTTAACACACATGTAAGCTTTTGGAATTTTTGATAGAAATTCTGGGCGTGACAAATTGG