Detailed information on CNT30692864


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523697Oryza sativaSetaria italica14.9926.7590.29103forward

Expression of CNT30692864

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MSVYISGLDRSTMVVQVSTKSQRLMDSGCNQPGTKRRQDQDNTSSVSYYKTF*

Sequence

>CNT30692864
GTGCGGGAGCTGCTGTTCTAAACGCAGGAGTCGATGCATCTAGCCGGTTGCAGGTAAGGTGAGCCTTCACCGCTGGTACGCCTGATTCTCCCTCCGCTTC
ACATAGCGAGTTCGGTCACTGTACCGGGGTCTATCTTGTGCTCTCTGAGGAACTGGCTCCACCCTTCTCTGCCTTTCTGGTGATCTTTGAACAATTTCTC
CGTTTACAAACAACTCAGCTGCAAAGAACGACAATGACATGAGAACCCAGACAAAGTTGTGCATATTGGAGGAATAATTCTTGAAGACAATCAACTGTGC
AGAATGTCAGTGTATATTTCAGGTCTGGATAGATCAACTATGGTTGTACAAGTAAGCACAAAGAGTCAAAGACTAATGGATTCTGGGTGCAATCAACCTG
GAACCAAAAGAAGACAAGACCAAGATAATACTTCCTCCGTTTCATATTATAAAACTTTCTAGCATTGTCCACATTCATATATATGTTAATGAATCTAGAG
TTCTAGACATATGTGTGCCTAGATTCATTAATATCTATATAAATGTGGGTAATGATAGAAAGTCTTATAACCTGAAACAGAGATAGTAAAAACCAGCTTT
CCATTGAGCATATACATTAACAAGACAGCTAGCGTAAAATTAACTGCATTTTACACAAGAAAAAAAGGATATAGAGAGGCAGGTAAC