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Detailed information on CNT30692833


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002899, E-value = 4e-131

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30551241Oryza sativaOryza brachyantha70.2799.4684.45553forward

Expression of CNT30692833

Peptides detected in this lncRNA

>peptide 1 (50 aa)
DIRWAEKKNPFFFLPFHFPCLFFLFLLKLSPQLTSPPQILSKNPNSSSAC*

>peptide 2 (41 aa)
GHKVGREKKPVLLPPLSLPLLVLSFPPQAEPPAHFSSPNPI*

Sequence

>CNT30692833
AGGACATAAGGTGGGCAGAGAAAAAAAACCCGTTCTTCTTCCTCCCCTTTCACTTCCCTTGCTTGTTCTTTCTTTTCCTCCTCAAGCTGAGCCCCCAGCT
CACTTCTCCTCCCCAAATCCTATCTAAGAACCCAAACTCAAGCTCTGCATGTTAGACCACAACAATCCCCATCATCCAAGCTTTCCATCCATCCCAACAT
CTTGCACATGCATGGAGAGTTGAGAGAGATCGAGAAGGAATAAAAGAGTGGTGGTTTCAGCCTGCAGGGCTGCAGCAGGAGCATTTTGTTTTCCTACATT
TGCTAGAAGGTGGCTGCAACTCACCCCGAGTTTATCTCTTTTGATTTCGGTTGAAGCAGCCCTAGGCAACGTCTCTTGCCGTCAGCCCAAGACCTTGCTC
CATCTCTTGCCATCAGCCCGAGGCCTTAGCCTCGCACGACCCTACGTCCAGGTTGCTGCCATGTGAGCGAAGTCCGGTGGAATTTGGAGAAAAGGGGAGT
GAAAATAGAAATCGATTTCTGAGATAGCTTTTGGGCTGAAAGAGATTCGGAGATTCCGGAGAGTAACGAGCCATATCCCGAGGAGGATAGTGACTACCCT
CAGCAACAAGGCAAGCACCTAAGCATATAGAACCTATGCTTTCTCTAAAAATGATTTGGTTGCAATCTATACGTATATATATGCATGCATTGCCTAGATA
TTAATATCGTCGGTTTATGGTGTATGGGAAGAACCTATTTATGCATTTAGTTCTTGTAATATTGCTTTCCTTATACCCTATTACCAC