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Detailed information on CNT30692791

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003777, E-value = 1e-121

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30102295	Oryza sativa	Oryza rufipogon	62.08	36.96	95.25	316	forward
CNT30578376	Oryza sativa	Oryza barthii	62.48	49.53	96.54	318	forward

Expression of CNT30692791

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MYCLCLFLYCFVEFCFFALVSDVLEESVFVEEGSEVFAEAQVEDKGSRRRRRLAYTPVELPVGVELKPSLDR*

Sequence

>CNT30692791
TTTTCCTTTTTCCCGTTTTTCTAATAGATTAAATCTTCTGAAAATCATAACTAAATAACCGTAGATCCGTTTCAGGTGGTTCAAGTTGCTAAATTTTTCT
AAAATCAAGATCTACATGTTAAAAATATCCACATGTACTGTTTATGCTTGTTTTTGTACTGTTTTGTTGAATTTTGTTTTTTCGCTTTAGTTTCCGACGT
TCTGGAGGAGAGCGTTTTCGTTGAGGAAGGTTCGGAAGTGTTTGCGGAAGCTCAAGTTGAAGATAAAGGATCCAGAAGGAGAAGACGTTTGGCTTATACC
CCAGTTGAGCTGCCTGTGGGAGTGGAGCTGAAGCCATCGCTAGATCGTTAATTCCGCTGCTGTTTTCTTTTCTTTTGTAAGTATGTAACGTTATTATTAA
GATGGATTTGTATATTAAATTGTCAGTTTGTGTACCTCGGCTGATTCCTGGATGAGGATTTTATGCACAAATTAGTTCGGAAATTACTAGTGAATTTCCG
GGCGTGACA