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Detailed information on CNT30692752

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30595968	Oryza sativa	Oryza meridionalis	38.56	31.72	87.83	263	forward
CNT30370167	Oryza sativa	Oryza glumipatula	100	49.71	98.53	682	forward
CNT30108849	Oryza sativa	Oryza longistaminata	100	69.95	99.41	682	forward
CNT30101327	Oryza sativa	Oryza rufipogon	83.14	56.7	100	567	forward

Expression of CNT30692752

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MKIQRHGEQQTDKINRDGELGGRRSKRGGGRVTSSHGRVAGVSCCCGHSQGRAAGNLDLLLPLVLFNWIVSYSYPS*

>peptide 2 (35 aa)
MVDSFLFSASVFLPSRSPAPYAAALSSDSSSSDQK*

>peptide 3 (29 aa)
MKISSYQHENPEAWGAANRQNQQGWRARW*

Sequence

>CNT30692752
GCTAGTATTGCTACAGCAAGAGGACCAGAATCTGCAGTCTCTTCCTGCTTGCTCCAGTGATTTCTGCAGATCTTCGTAGTCTTCACCCAAGAACTAGTTT
TCTTCAACTTCGGTTGTATTTTTCAATGCTTTGTATGCCTCTTCTTCCTTTTGCAAGGACTGCTGCATGGTAGACAGCTTTCTCTTTTCAGCATCAGTCT
TCCTCCCTAGCAGATCACCTGCTCCCTATGCAGCAGCACTAAGTTCTGATTCGAGTTCATCAGATCAAAAGTAAGGTTTCCTGCTCTTTTTCTTGGAGAT
AACGGCCTTCCAATCTTCTGCAGAGCTGGCAACATGAAAATATCAAGTTATCAACATGAAAATCCAGAGGCATGGGGAGCAGCAAACAGACAAAATCAAC
AGGGATGGCGAGCTCGGTGGTAGGCGGAGCAAGCGAGGCGGCGGTCGGGTGACGAGCTCGCACGGGCGCGTGGCAGGAGTGAGCTGCTGCTGTGGCCACT
CACAAGGTCGAGCAGCTGGCAACCTCGACTTGCTTCTTCCCCTTGTTCTTTTTAATTGGATTGTGTCTTATTCCTATCCTTCATAGTTCTTGCTCAGTTG
CTTCGCTTGTGTTTGTAAAAGTTCTTGTGTATTGCTTGATTGCCTCGGTCTTACGCGAAGGAAAACAAAAATGAGGTCGGAG