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Detailed information on CNT30692751


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001336, E-value = 7e-109

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370494Oryza sativaOryza glumipatula49.8553.0591.53496forward
CNT30101447Oryza sativaOryza rufipogon35.9844.42100358forward

Expression of CNT30692751

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MPISPPPQSCRRPFFIVVLRGAAPHLSFPSLRRFVSASEVFKKTN*

>peptide 2 (33 aa)
LLFIFNLRTAELRPSWLGFSPPNLALSLVYSEN*

Sequence

>CNT30692751
CTACTGTTCATCTTTAACCTCAGGACAGCCGAACTGAGACCGAGTTGGCTCGGTTTTTCTCCTCCGAATCTGGCCTTATCTCTCGTGTATTCCGAAAATT
AGTTGAGGGGATTTGTTTCCCTTATCCTCCTCTATCTCTTCCCCCAAAAATCCGATTTTATCCCTTTGAATTCGACGCGAATTTGGATTCGTTTTCGAGT
TTATCTCTTCACCAAACCCTAGGTTTTCCAAGCGCGATTCCTTACGTTCCAAGCCCGATCTCTCTCTCCAGTGGCTATAAATAGAGTCCTCTCCCTCTCC
TCCTTCGTTTGCCACCCTCTCCCGAGCTCGCCGTTGGCCGTAGCGCCCTAGCCGCGTCTGTCCTAGCGCCGCCGTCGCCGCCGAGTTCCCAGCCGCGCCG
CGCCGCGTTTTCAACCGCCTTTGCAGCCGCCTTCTCCGGTCGCTGTCGCCACCATCAGGTTCGCGAGGAGGAGCTGCACACCATCCACCACTCGGCCGAA
GGCGAAGCCCGCCGTAGCGCCGCCGACGCCGTCATGCCGATCTCGCCACCGCCTCAATCTTGTCGCCGGCCGTTTTTCATCGTCGTCCTTCGTGGTGCCG
CCCCTCATTTGTCGTTTCCGTCGTTGCGAAGGTTCGTGAGTGCGTCGGAAGTGTTCAAGAAGACTAATTGAAGACCGATTATTGCAAGTTGAAGAAAAAA
GATCCAGAAGGAGAAGACGTTTGGTTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCTGAAGCCATCGCTAGACCGTTAATTCCGCCGCTGTTTTTC
TTTTCTTTTGTAAGTATGTAACGCTGTTATTATGATGGATTTGTATATTAAATTGTCAGTTTGTGTACCTCGGCTGATTCCTGGATGAGGATTTTGTGCA
CAAATAAGTTCGGAAATTACTAGTGAATTTCCGGGCGTGACAGTAGGGCCTGCTGGTCTGCAGCTGCTCGGATGGCAACTCGTTCACGATGTTCC