Detailed information on CNT30692625


BLAST search results

BLAST vs Swiss-Prot:
sp|P85955|DRE1_PSEMZ, E-value = 5e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521857Oryza sativaSetaria italica53.36786.55119forward
CNT30708606Oryza sativaGlycine max20.188.3591.1145forward
CNT30590385Oryza sativaMusa acuminata52.9113.0485.59118forward
CNT3085638Oryza sativaVigna radiata26.462.3188.1459forward
CNT30254792Oryza sativaAvena sativa43.0521.4888.5496forward
CNT30469799Oryza sativaSaccharum spontaneum52.477.0388.03117forward
CNT30141830Oryza sativaLolium perenne74.4421.4281.93166forward
CNT30338358Oryza sativaEragrostis tef50.229.5591.07112forward
CNT30364944Oryza sativaSorghum bicolor22.424.359050forward
CNT30101508Oryza sativaOryza rufipogon47.5340.6189.62106forward
CNT30583280Oryza sativaEchinochloa crusgalli22.422.749050forward
CNT30498181Oryza sativaDigitaria exilis78.4810.6789.71175forward
CNT30603672Oryza sativaOryza punctata38.125.8683.5385forward
CNT30550541Oryza sativaOryza brachyantha44.847.7389100forward

Expression of CNT30692625

Peptides detected in this lncRNA

>peptide 1 (72 aa)
EVVVGRREREGGDEREVGSGERAAEVPRGDVVGPRRGLGGVVGAEPHARPLRRVPDLRREPPPRPLPHPPVPR

>peptide 2 (73 aa)
GGGSGATGAGGRRRAGSWFWRAGRGGSARRRRRPAPRPRRSRRCRATRAPASPGPGSPPRTSPTAASSPPCTSA

Sequence

>CNT30692625
GGGAGGTGGTAGTGGGGCGACGGGAGCGGGAGGGAGGAGACGAGCGGGAAGTTGGTTCTGGCGAGCGGGCCGCGGAGGTTCCGCGCGGCGACGTCGTAGG
CCCGCGCCGCGGCCTCGGCGGAGTCGTAGGTGCCGAGCCACACGCGCGCCCGCTTCGCCGGGTCCCGGATCTCCGCCGCGAACCTCCCCCACGGCCGCTT
CCTCACCCCCCTGTACCTCGGCG