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Detailed information on CNT30692603


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002896, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30108832Oryza sativaOryza longistaminata98.7999.6997.081303forward
CNT30101345Oryza sativaOryza rufipogon35.1100100463forward

Expression of CNT30692603

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MHGSYSCCSGDGSSSGSGSICTSSSNVNMNRSNICSGTCEFSSVLYIC*

Sequence

>CNT30692603
GTTGCATACATCAAATAATGCATCTCATACATTATTCATCTAAAATAGAAATAGTGAAAATTAAATAAAAATATTGGTGTGATCTGTGACCACACCTAAT
TGCTTTAGGAGATTTCAAATATAAGATTTAGGCAAAAGAGAAAATTTAGAGTTGCTTGATGTCACATATTTTGCAACCAAACCATTTCGGGGCACAAAAT
TAGTAACATTAGCCATCTCTTAGTAGCTTCCAAAACTATTTATTTCTTAGGTAAACTCTGAGTTTTTGGGCAATTGAAAATCAGTCCCTAAACTCAAAGT
AATCTCCATATTTTTAAAGTCTATGGTACTATAATGCAAAAGTTACAAATATTATATTTTTCACTAGGTTTTTATTTAATTGCAAATCTGTGAAAAATTA
TGCTGAGCCTCCACCGAATAAACCATGCTTAGGTGTCAAACAGGGAGACCACCAGTAAAACCTTAGTAGGTGAGTCACCTAGTAGTCAACCATGTCCCTG
TCACAAAAACCATATCAGTGTGAACTCCATCCTGACCGAGCCTCATTTTCCTCGTAGAGACCAAAACCAGTTAGCAAGAAGAACCACCATAACCAGAGAG
TTAGAGAAGAAAAGAAAAATACAAGAGGGCAAAATCACCCAACATCAGGTGGAGCAGGGGCTCCAGCTCCATTTGGAGCAGGTACCCCAGCTCAAGGAGG
AGACGCTGATTCAGTAGAATCAACCAACCAATAGAAGCTGCAGTAGAAGCAAAAGAGGAGTTCAACTATATATTTTCACAACCACTGAATAATCAACAAA
GAGAAGTTCGAGTTCCTGAGGAATCATTCATTTCGATTGAATTTGAGGGTATTCGTGGTGTTTTTTATCCAGATGTTGAATCATTAGAATCTGTTGAACA
AGAATATATGGCTGGAAGTGAAGGAACTCATGTTATGGATGACAACCAGGAAGGACTCTACGATGATGCTGAGATTGACTATGATAATTAGTGTATAATA
TGCATGGTTCATATAGTTGCTGTAGTGGTGATGGTAGTAGCAGTGGCAGCGGTAGTATTTGTACTAGTAGCAGTAACGTTAATATGAATAGAAGCAATAT
CTGTAGCGGTACTTGTGAATTTTCTAGTGTGTTGTATATTTGCTGAGCTTTTGGGGTTTGTATATTATTTTGCTGTTATCGCTCGAGGCTTGTCTTGAGC
TGTATCTATGGTACTATAATAACTGGAACCAATGCGATGTTTCTGCTATGCAACTCTGATGTGCATATCTCTGAGTAAACGATGTTTATGAAGATATATG
CTATAGACTTATATTCTAC