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Detailed information on CNT30692524


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100906Oryza sativaOryza rufipogon42.5625.05100249forward

Expression of CNT30692524

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MEMTIFRATTNTAQTCTLFLPPPIVLDYLATS*

>peptide 2 (67 aa)
MKIKNQMSGQEKSEGQHSSLAGTPTLSLSRLSTLAHTPSFSASIGHLFPPPDGGDGGGVTGGVGVGQ*

Sequence

>CNT30692524
GTACGTACACTGGAGGAAACTTTTATTTGACAGTACGCATTAAAATAACAAGATACATATATTAGATGATCGATCTGATCATCAATAATCACACTGATAG
ATCGAGATAAGTATATATGTATGACACAACTGCAACACACAGACTAAGCCATGCAAAGCTTAAGCCTTAATTAGGTAGCTAGGGTTGTGGTGGTAATGAA
GATTAAGAATCAGATGAGTGGGCAGGAGAAGTCGGAAGGGCAGCACTCCTCGCTCGCCGGCACCCCCACCTTGAGCTTGAGCAGGTTGAGCACGTTGGCG
CACACGCCCAGCTTCAGCGCGTCGATCGGGCACTTATTCCCTCCACCCGACGGCGGCGACGGAGGCGGCGTCACCGGCGGCGTCGGGGTGGGGCAGTAGG
GCTCGCATGCCTGCACTGCACCCATCTGCATGGAGATGACCATATTCAGAGCAACGACGAACACCGCACAAACCTGCACCTTATTCTTGCCGCCGCCCAT
CGTATTGGACTACTTAGCTACTTCTTAATTGTACTAGCTTAATTAATTGATGATGATATAGTATATTTTGCTGCTGCTAGCTAGC