Detailed information on CNT30692505


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SU35|ERLL1_ARATH, E-value = 8e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671301Oryza sativaSetaria viridis51.5556.785.93199forward
CNT30226858Oryza sativaHordeum vulgare48.1966.1990.32186forward
CNT3016364Oryza sativaZea mays23.5812.0886.8191forward
CNT30593752Oryza sativaEragrostis curvula26.688.6290.29103forward

Expression of CNT30692505

Peptides detected in this lncRNA

>peptide 1 (41 aa)
FDTYICMTKHSISTCERVYIYMDIDAWCNGMVIKGSEDRLI*

>peptide 2 (73 aa)
MLRLMPRMLALMAVQRQTAASRSTRPPSNGQHCSLSGTPIFSFSRLSTLAHTLSFSASIGHLFPPPDGGDGGGV

Sequence

>CNT30692505
GTTCGACACATATATATGTATGACAAAACATAGTATAAGTACGTGCGAAAGGGTTTATATATATATGGATATTGATGCATGGTGTAATGGTATGGTAATT
AAGGGATCGGAGGATCGATTAATTTAGAGAGGGCAGGTGAAGTCGGAGGGGCAGATCGACGGGGATGTTGAGATTGATGCCGAGGATGTTGGCCTTGATG
GCGGTGCAGAGGCAGACGGCGGCGTCGAGGTCGACGAGGCCACCCAGCAACGGGCAGCACTGCTCGCTCTCCGGCACGCCGATCTTCAGCTTCAGCAGGT
TGAGCACGTTGGCGCACACGCTCAGCTTCAGCGCGTCGATCGGGCACTTATTCCCTCCACCCGACGGCGGCGACGGAGGCGGCGTC