Detailed information on CNT30692405


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 5e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552971Oryza sativaOryza glaberrima8552.4295.38238forward
CNT30447822Oryza sativaSaccharum spontaneum23.939.988.0667forward
CNT30684877Oryza sativaTriticum urartu32.8614.5191.392forward
CNT30596850Oryza sativaOryza meridionalis7043.9596.43196forward
CNT30575801Oryza sativaOryza barthii83.2157.5397.42233forward
CNT30116235Oryza sativaOryza nivara83.9343.2897.45235forward

Expression of CNT30692405

Peptides detected in this lncRNA

>peptide 1 (39 aa)
GLVVVLRTFLCVASSEVEWSSSYISCCTGSRRGRSGRSS*

Sequence

>CNT30692405
GGCCTGGTGGTCGTTCTTCGTACGTTCTTGTGTGTAGCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTAGTTGCTGCACTGGAAGCCGGAGGGGAC
GGAGCGGCCGCAGTAGTTGACGAGGAGGCTGCAACACGGCTGCCGCGGCGGCGTCCCCAGCTGCACGTTTATCAGCCCATTCAGCACGTTCGCGCACACC
CCCAGCTTCAGCGTGTCGATCGGGCATCTTCCTCCTCCCCCGCCGCCGCCGCTTCCTCCTCCTCCGCCGCCTCCGCTTCC