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Detailed information on CNT30692364


BLAST search results

BLAST vs Swiss-Prot:
sp|P50378|EFTU_GONPE, E-value = 1e-14

BLAST vs NONCODE:
NONBNAT001751, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521308Oryza sativaSetaria italica77.5378.1693.36873forward
CNT30224163Oryza sativaHordeum vulgare38.0163.7991.59428forward
CNT30387246Oryza sativaTriticum turgidum78.6976.9888.71886forward
CNT30132437Oryza sativaLolium perenne78.6973.7187.81886forward
CNT30101006Oryza sativaOryza rufipogon46.8975.8694.7528forward
CNT30116376Oryza sativaOryza nivara42.7288.5898.34481forward
CNT30594443Oryza sativaEragrostis curvula78.6976.3192.21886forward
CNT30603788Oryza sativaOryza punctata99.1194.7497.041116forward

Expression of CNT30692364

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MMITWEVKLAASLAGSSLELEATYPRFRSFTATFFTLNPTLSPGRASWRASWCISTDLTSVVRPLGPKVTTIPGLRTPVSTRPTGTVPIPPILYTS*

>peptide 2 (34 aa)
IFFFSNVNTRIPKQPMDNNRTQSISFNRTEINEY*

>peptide 3 (81 aa)
MTPTATVCLMSRTAKRPRGGYSEKVSTTMGLVGIILTIPASPFLRNLGSFSSSLPDRLSILVTSSANLTAMWEVWQSSTGA*

Sequence

>CNT30692364
GATTTTTTTTTTTAGCAATGTAAATACTCGCATTCCAAAACAGCCGATGGACAATAATCGGACTCAGAGCATCAGTTTTAACCGAACAGAAATAAACGAG
TATTAAACGACTGACATAGTGCACATTGCGAGCAGATATTAACGGTCCATGAAACGAGAGCCATGGCCGTGGGCAAAACTTAACAAATACTAGAACTAGA
TATCTCAACTGCAGACATGCAAACCACCATTTGAACGAGGCTCACTTCTTCTTGGCGGCAGCCTTGGTCACCTTGGCACCGGTTGGGTCCTTCTTCTCCA
CGTTCTTGATGACGCCAACAGCCACCGTTTGCCTCATGTCACGCACCGCAAAACGACCAAGAGGAGGGTACTCAGAGAAGGTCTCCACAACCATGGGCTT
GGTGGGAATCATCTTAACCATACCAGCATCACCGTTCTTGAGGAACTTGGGCTCCTTCTCCAGCTCCTTACCAGATCGTCTGTCGATCTTGGTCACCAGC
TCAGCAAACTTGACGGCAATGTGGGAGGTGTGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCGATCTGGCCAGGGGTGGTTCATGATGATCACCTGGGAG
GTGAAGCTGGCAGCCTCCTTGGCAGGGTCATCCTTGGAGTTGGAGGCCACGTACCCACGCTTCAGATCCTTCACCGCAACGTTCTTCACGTTGAACCCGA
CGTTGTCACCAGGAAGAGCCTCCTGGAGAGCCTCGTGGTGCATCTCAACCGACTTGACCTCAGTGGTCAGGCCGCTGGGACCAAAGGTCACCACCATACC
AGGCTTGAGGACTCCAGTCTCAACACGACCCACAGGCACGGTGCCAATACCACCGATCTTGTACACGTCCTGAAGGGGAAGACGCAGGGGCTTGTCTGAT
GGCCTCTTGGGCTCGTTGATCTGGTCAAGAGCCTCAAGCAAGGTGGGGCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCTCAA
ACCCAGAGATGGGAACGAAGGGAATCTTGTCAGGGTTGTAGCCGACCTTCTTCAGGTAGGATGAGACTTCCTTCACGATTTCATCGTAACGGGCCTTGGA
GTACTTGGGAGTGGTGGCATCCATCT