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Detailed information on CNT30692356


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3092760Oryza sativaSolanum tuberosum29.219.0881.82132forward
CNT30553024Oryza sativaOryza glaberrima55.0917.4495.98249forward
CNT30422340Oryza sativaPapaver somniferum26.7714.2980.99121forward

Expression of CNT30692356

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MLLSASVNSISSIPSLVYQWRKALRRNMAVNCSLTRRNISWMEVELPT

>peptide 2 (39 aa)
MTTNEGMQQVVAHSTQAAAVAADTATAHCVFVPIEIYVA*

Sequence

>CNT30692356
ATAACATTTCCTAACATATACAGAGATAGAAAAGAGTAAACCACGGTTCATGTACATGAATAAACAAATTTAGACAGAGAACAACGATGACAACGAACGA
AGGCATGCAACAAGTAGTAGCGCACAGTACACAAGCAGCAGCAGTAGCAGCAGACACGGCAACGGCACATTGTGTGTTTGTACCGATCGAAATATATGTA
GCGTAGCGTAGCAGAGAGCCAGAGAGGCAAAGCGGGAGGGATCGATCGATCGATCGATCAGGCCTCGTCGGCGGCGGCGGCGTCGTCGTCCTCGTCGTAG
TCGTTCATGTTGCTCTCGGCCTCGGTGAACTCCATCTCGTCCATTCCCTCGCTGGTGTACCAGTGGAGGAAGGCCTTGCGGCGGAACATGGCGGTGAACT
GCTCGCTGACGCGGCGGAACATCTCCTGGATGGAGGTGGAGTTGCCGACGAA