Detailed information on CNT30692341


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522327Oryza sativaSetaria italica26.3813.6288.0667forward
CNT30369763Oryza sativaOryza glumipatula23.629.9210060forward
CNT30100667Oryza sativaOryza rufipogon38.198.8610097forward
CNT30575483Oryza sativaOryza barthii23.626.1310060forward

Expression of CNT30692341

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MARTRPGSDLCARSARRLCHRHLGLDGGGGGAEEEAWLELEEEMAAVVLAAEAERRVTVRSVLKNLDSPWSAPVR

>peptide 2 (66 aa)
FLMSFEFVLRWRGRGPAATCARGRRGGSATGTWAWTAAAAAPKRRRGWSWRKKWRRWSWRRRRRGG*

Sequence

>CNT30692341
TTCTTGATGTCTTTTGAGTTCGTTCTTAGATGGCGAGGACGAGGCCCGGCAGCGACTTGTGCGCGCGGTCGGCGCGGCGGCTCTGCCACAGGCACTTGGG
CTTGGACGGCGGCGGCGGCGGCGCCGAAGAGGAGGCGTGGTTGGAGTTGGAGGAAGAAATGGCGGCGGTGGTCTTGGCGGCGGAGGCGGAGAGGCGGGTG
ACGGTGAGGTCGGTGTTGAAGAACCTTGACTCGCCGTGGTCGGCGCCGGTGAGG